Ochotona princeps (American pika): 101532824
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Entry
101532824 CDS
T07609
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1 isoform X1
KO
K10031
C-X-C motif chemokine 12
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04060
Cytokine-cytokine receptor interaction
opi04061
Viral protein interaction with cytokine and cytokine receptor
opi04062
Chemokine signaling pathway
opi04064
NF-kappa B signaling pathway
opi04360
Axon guidance
opi04670
Leukocyte transendothelial migration
opi04672
Intestinal immune network for IgA production
opi04810
Regulation of actin cytoskeleton
opi05163
Human cytomegalovirus infection
opi05200
Pathways in cancer
opi05323
Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
101532824 (CXCL12)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
101532824 (CXCL12)
04061 Viral protein interaction with cytokine and cytokine receptor
101532824 (CXCL12)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
101532824 (CXCL12)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
101532824 (CXCL12)
04672 Intestinal immune network for IgA production
101532824 (CXCL12)
04062 Chemokine signaling pathway
101532824 (CXCL12)
09158 Development and regeneration
04360 Axon guidance
101532824 (CXCL12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101532824 (CXCL12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
101532824 (CXCL12)
09163 Immune disease
05323 Rheumatoid arthritis
101532824 (CXCL12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
opi04052
]
101532824 (CXCL12)
00536 Glycosaminoglycan binding proteins [BR:
opi00536
]
101532824 (CXCL12)
Cytokines and neuropeptides [BR:
opi04052
]
Cytokines
Chemokines
101532824 (CXCL12)
Glycosaminoglycan binding proteins [BR:
opi00536
]
Heparan sulfate / Heparin
Chemokines
101532824 (CXCL12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
101532824
NCBI-ProteinID:
XP_004598717
LinkDB
All DBs
Position
18:67706352..67716715
Genome browser
AA seq
119 aa
AA seq
DB search
MDAKVVAVLALVLAALCLSDGKPVSLSYRCPCRFFESHVARANVKHLKILNTPNCALQIV
ARLKSNNRQVCIDPKLKWIQEYLEKALNKGRREEKVGKKEKIGKKKRQKRRKAAQKRKN
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggacgccaaggtcgtcgccgtgctggcccttgtgctggccgcgctctgcctcagcgat
gggaaacccgtcagcctgagttacaggtgcccctgtcgattcttcgagagccacgtggcc
agagccaacgtcaagcatcttaagatcctcaacactcccaactgtgcccttcagattgtg
gcccggctgaagagcaacaaccggcaagtgtgcattgacccgaaactgaaatggatccag
gagtacctggagaaggccttaaacaaggggcgcagagaagaaaaagtggggaaaaaagaa
aagataggaaaaaagaagcgacagaagaggaggaaggcggcccagaaaaggaaaaactag
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