KEGG   Ochotona princeps (American pika): 101533161
Entry
101533161         CDS       T07609                                 
Symbol
TREX1
Name
(RefSeq) three-prime repair exonuclease 1
  KO
K10790  three prime repair exonuclease 1 [EC:3.1.11.2]
Organism
opi  Ochotona princeps (American pika)
Pathway
opi04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:opi00001]
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    101533161 (TREX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:opi03400]
    101533161 (TREX1)
Enzymes [BR:opi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     101533161 (TREX1)
DNA repair and recombination proteins [BR:opi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    101533161 (TREX1)
SSDB
Motif
Pfam: RNase_T Herpesvir_UL11
Other DBs
NCBI-GeneID: 101533161
NCBI-ProteinID: XP_004581799
LinkDB
Position
9A:16989173..16990111
AA seq 312 aa
MMGSQTPPPELVQTLIFLDLEATGLPFSQPKITELCLLAVHRCALESPSTSQSPVPPPPR
VVDKLSLCVAPGKACSPTASKITGLSTAVLQAHGRQLFDDNLASLLLAFLRRQPAPWCLV
AHNGDGYDFPLLQAELAMLGRASILDRAFCVDSMAALKALEQAESPSVHSPRKSYSLGNI
YTRLYGQEPPDSHTAEGDVLALLSICQWRPQALLRWVDAHARPFSTVKPMYEATASLRTS
PQPSAGATMTRLRAAKNTSASPSRSKRSTALPTPKDPGDLPKGELLASLGLLAFLTLAVA
TLYELFLAPQGQ
NT seq 939 nt   +upstreamnt  +downstreamnt
atgatgggctcacagaccccacccccagagcttgtgcagacccttatcttcttggacctg
gaggccaccggactgcccttctcccagcccaagatcacagagctgtgcctgcttgctgtc
cacagatgtgccctggagagcccctccacttcccagagtccagtgcccccaccaccccgt
gtggtggacaagctctccctatgtgtggccccgggaaaggcatgtagccccacagccagc
aagatcacaggcttgagcacagctgtgctgcaagcgcatggacgtcagctcttcgatgac
aacctggccagcctgctccttgctttcctgcggcgccagccagcaccctggtgcctcgtg
gcacacaatggtgacggctatgactttcccctgctgcaggcagagctggccatgctgggc
cgtgccagcatcctggacagagccttctgtgtggacagtatggctgccctcaaggcccta
gaacaagctgagagcccctcggtgcacagcccgaggaagagctacagcctgggcaacatc
tacacacgcctgtacgggcaggagccgccagattcccacacagctgagggcgacgtcctg
gccctgctcagcatctgccagtggaggccccaggctctgctgcgctgggtggatgctcac
gccagacccttcagcactgtcaagcccatgtatgaggccactgcttctctgaggaccagc
ccgcagccatctgctggtgcaaccatgacacgcctacgtgctgccaagaacaccagtgcc
agccccagcaggagcaagagatccacagctcttcctacacccaaggaccctggagacctg
cccaaaggtgagctgctggcctccctgggcctgctggctttcttgaccttggcagtagcc
acactgtatgaactgttcctggccccacaggggcagtag

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