Ochotona princeps (American pika): 101533873
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Entry
101533873 CDS
T07609
Symbol
HPS6
Name
(RefSeq) Hermansky-Pudlak syndrome 6 protein
KO
K20192
Hermansky-Pudlak syndrome 6 protein
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101533873 (HPS6)
Membrane trafficking [BR:
opi04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
101533873 (HPS6)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HPS6_C
HPS6
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
101533873
NCBI-ProteinID:
XP_004580293
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Position
18:complement(23313781..23316204)
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AA seq
807 aa
AA seq
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MKRAGTLRLLSDLSNFSGAARLRELLAGDPAVRVRCSPDGRHLLLLRPPGAPAPQLLVAV
RGAGAELERAWPVGQASPLDAFFLPGPAVPALVLVWESGLAEVWGAGVGPGWRLLQSTEL
CPAGGARLVAVAAPRGRLVWCEQHLPGAENQLGPPMAAFSHSVCVRTLEPSGEAGTHLGR
ARVLLRHCPCFGLLASRKDLFLVPTASTWPGVAHILLIWSPGKAKVTVTAPQLGVSHCKS
LNPGRGDSWDFRALLRGLPGLLGPREPLALHTCAPTAQGLLFLDSKGTVSLLQSHGGVRV
VGTLQEGPGGLARGSAALGTFQGTLACVLGSTLELLDLSSGQLLERKVLSTDRAHLLDPP
LPGMEDEEELESQGCLRMLSALGLFCVGWKAPQGLEVPSARDLVFEEACGYYQRRSLRGA
QLTPEELRHSSTFRAPQALASILQGHLPPSTLLATLRTELRDYRGLEQLKAQLVAGDEEE
AGWAELADQEVTRLLRTELTGDQLAQLNTIFQALPTAAWGTILRTLQLQLDGNGRLRSQA
PPDVWKKVLDGPAAGKEPPNGILPPFELLCQCLCRMEPRWLPLFVELAQQQGGPGWAAGS
PGLPLYRRALAVLGEEGTRPEALELELLLGSGRPKAVLQAMEQLVQKEQWERALEVGLAL
GPSSPLLRSEIFKLLLAQFAKHRQLDAHLPLLCRLCPPELTPTELLLLLQAHLPDDVGPP
TPFPEPGAEPPLTVGLLRTLLEQTGAQGRPSGPVLSLYEDILWDAGTPPPTPPRGPMTIP
QASDPTGLETWVPSGQNLCMTDTGNHF
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgcagggactctgcgcttactttcggatctgagcaacttcagcggcgccgcc
cggcttcgtgagttgctggcaggggaccccgcggtccgagtgcgctgcagcccggacggc
cgccacctgctgctgttgcgacccccgggagcccctgcgccgcagctgctggtggctgta
cgcggagccggtgcggagctggagcgggcctggcccgtgggccaggcctctccactggac
gccttcttcctgccgggacccgcagtcccggcgctcgtcctggtgtgggagagtggcctg
gccgaggtgtggggtgcgggtgtggggccgggctggcggctactgcagagcaccgagctg
tgtccggccggcggagcccgcttggtggccgtggcggcgccccgaggccgcctggtatgg
tgtgagcagcatctgcccggcgctgagaaccagctggggccgcccatggccgctttcagc
cacagcgtgtgcgtccggaccctagagcccagcggcgaggccggcacccatctgggccgt
gcccgcgtcctgctgcgccactgtccctgctttgggctgttagcctcccgcaaggaccta
ttcctggtgcccactgcctccacctggcctggcgtggcccacattctgctcatctggagc
ccagggaaagccaaggtgacagtgactgccccacagctcggtgtatctcactgtaagagt
ctgaacccgggacgaggggactcatgggacttccgggccctacttcgaggcctgcctggg
ttgctgggcccgcgggagccgctggccctgcatacatgcgcgcccactgcgcaaggcctg
ctattcctggactccaaaggcacggtgagcctcttacagtcccacggcggtgtccgggta
gtgggcactctgcaggagggccctggaggcctggccaggggctctgcagccctgggaacc
tttcagggaaccctggcctgtgtgctgggctccaccttggagctgctggacctgagcagt
gggcagctgctggaaaggaaagtcctaagtacggacagggcgcatttgctggacccccca
ctccctggcatggaggatgaggaggaactggagagtcagggctgtcttcgcatgctttca
gccttgggtctgttttgtgtgggttggaaagccccacagggcctcgaagtaccttccgcc
agagacctggtgttcgaggaggcttgcgggtactatcagcggcggagtctgcgaggtgct
cagctcacacctgaggaactgagacacagcagcacgttccgggcacctcaggccctggcc
tccatcctccagggccatctgcccccgtccacactgctggccacactgaggactgagctc
cgtgactaccggggcttggagcagctcaaagcccaactggtggctggggacgaagaggag
gctggctgggcagagctggccgaccaagaggtgacacgcctgctgaggacagagctgaca
ggagaccagctggcccagctcaacaccattttccaagcactgcccacagcagcctggggc
accatcctcaggaccctgcagctgcagctggatgggaatggcaggctgcggtcccaggct
cctcctgatgtgtggaagaaagttctagatggtccagcagctggaaaggaaccccctaac
ggaatactgcccccctttgaactgctgtgccaatgcctctgccgaatggaaccccgatgg
ctgccactgtttgtggagctggcccagcagcagggtgggccgggctgggcagccggaagc
ccggggctgcctttgtatcgccgagccctggctgtgctgggtgaggaggggaccaggcca
gaggcactggagctagaactgctgttgggcagtgggcggcctaaagctgtgctccaagcc
atggagcagctggtgcagaaggagcagtgggagcgggctctggaggttggcctggccctt
ggcccctccagcccactgcttcgaagtgagatcttcaaactgctgctggcccagtttgcc
aagcaccgccaactcgatgcacacctgcccctcctctgtcgcctgtgtccaccagaactg
actccaactgagctcctcctgttgcttcaggcacacctcccagatgatgtgggacctccc
accccgttccctgagccaggggcagaaccccctctcacagtgggcctgctccgaaccctg
ctggaacagactggggctcaaggacggccttcaggcccagttctaagcctatacgaggac
atcctatgggacgcaggcactcctcctcccaccccaccccggggacctatgaccattccc
caggcatccgaccctacaggcctggaaacctgggtaccatcgggacagaacctctgcatg
actgacacaggaaatcatttctag
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