Ochotona princeps (American pika): 101535416
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Entry
101535416 CDS
T07609
Name
(RefSeq) HLA class I histocompatibility antigen, B alpha chain-like
KO
K06751
MHC class I antigen
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04144
Endocytosis
opi04145
Phagosome
opi04218
Cellular senescence
opi04514
Cell adhesion molecules
opi04612
Antigen processing and presentation
opi04940
Type I diabetes mellitus
opi05163
Human cytomegalovirus infection
opi05165
Human papillomavirus infection
opi05166
Human T-cell leukemia virus 1 infection
opi05167
Kaposi sarcoma-associated herpesvirus infection
opi05168
Herpes simplex virus 1 infection
opi05169
Epstein-Barr virus infection
opi05170
Human immunodeficiency virus 1 infection
opi05203
Viral carcinogenesis
opi05320
Autoimmune thyroid disease
opi05330
Allograft rejection
opi05332
Graft-versus-host disease
opi05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101535416
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101535416
04145 Phagosome
101535416
09143 Cell growth and death
04218 Cellular senescence
101535416
09150 Organismal Systems
09151 Immune system
04650 Natural killer cell mediated cytotoxicity
101535416
04612 Antigen processing and presentation
101535416
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
101535416
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
101535416
05170 Human immunodeficiency virus 1 infection
101535416
05168 Herpes simplex virus 1 infection
101535416
05163 Human cytomegalovirus infection
101535416
05167 Kaposi sarcoma-associated herpesvirus infection
101535416
05169 Epstein-Barr virus infection
101535416
05165 Human papillomavirus infection
101535416
09163 Immune disease
05320 Autoimmune thyroid disease
101535416
05330 Allograft rejection
101535416
05332 Graft-versus-host disease
101535416
09166 Cardiovascular disease
05416 Viral myocarditis
101535416
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
101535416
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
opi04147
]
101535416
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
opi00537
]
101535416
Exosome [BR:
opi04147
]
Exosomal proteins
Proteins found in most exosomes
101535416
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
opi00537
]
Antigens
101535416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_3
ig
C2-set_3
C2-set_2
SNO
Motif
Other DBs
NCBI-GeneID:
101535416
NCBI-ProteinID:
XP_012786144
LinkDB
All DBs
Position
12:28404652..28407949
Genome browser
AA seq
348 aa
AA seq
DB search
MASLGPWTLLLLLARALALTETLERSHSLMYFVTCMSKPDLKEPRFLAVGYVDDTQFGRF
DSDAENPRVELREPWKQQMEKYVVSHTELASSCTRYFRNYLNKLRGYYNQSEAGSHTLQF
VYGCEIGADGRLLRGNSRFAYDGTDHIALNEDLRTWTAADTAAQISKRKWEAEDVAEHYR
AYLKRQCVKWQHRFLELAKETLNHTDPPTAHVTHHPVSDQKATLRCWALGFYPKDITLTW
QRDGEDLTQDMELVETRPSGDGTFQKWAAVLVPSGEEQNYTCHVEHEGLPEPLTVRWEPP
QPTVPMWGVIAGLVLLAAALIGAVVAAVMMKRKRSGGKEGSYTRAPGI
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctggggccatggaccctccttctgctgctcgcaagagccctggccctgacc
gagaccctggagcgctcccactccctgatgtatttcgtcacctgcatgtccaagcccgac
ctcaaggagccccgcttcctcgccgtgggctacgtggacgacacgcagttcgggcgcttc
gacagcgacgccgaaaacccgagggtggaactacgggagccgtggaagcagcagatggag
aagtacgtggtcagtcacacagaactcgctagcagctgcacacgctatttccgcaactac
ctgaacaaactgcgcggctactacaaccagagcgaggccggctctcacacgcttcagttc
gtctatggctgcgagatcggggcagatggacgcctcctccgcgggaattcacggttcgca
tacgatggcactgaccacatcgccctgaatgaggacctgcgcacctggacagcggctgac
acagcagctcagatcagcaagcgcaagtgggaggctgaggatgtggcagagcattacaga
gcatacttgaagaggcagtgtgtgaagtggcaacacagattcctggagttggcaaaggaa
acactaaatcacacagacccacccacagcacatgtgacacaccacccagtctctgaccag
aaggccaccctgaggtgctgggccctgggcttctaccccaaggacatcacactcacctgg
cagcgagatggggaggacctgacccaggacatggagctggtggagaccaggccttcaggg
gatggaaccttccagaagtgggcagctgtgctggtgccttctggagaggagcagaattac
acatgccacgtggagcatgaggggctgcctgagcccctcactgtgagatgggagcctcct
cagcccactgtgcccatgtggggagtcatcgctggcctggtcctcctggcagctgcgctc
attggagctgtggtcgctgctgtgatgatgaagaggaagcgctcaggtgggaaagaaggg
agctacactagggctccaggcatctga
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