Ochotona princeps (American pika): 101536290
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Entry
101536290 CDS
T07609
Symbol
CD4
Name
(RefSeq) T-cell surface glycoprotein CD4
KO
K06454
T-cell surface glycoprotein CD4
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03250
Viral life cycle - HIV-1
opi03260
Virion - Human immunodeficiency virus
opi04060
Cytokine-cytokine receptor interaction
opi04514
Cell adhesion molecules
opi04612
Antigen processing and presentation
opi04640
Hematopoietic cell lineage
opi04658
Th1 and Th2 cell differentiation
opi04659
Th17 cell differentiation
opi04660
T cell receptor signaling pathway
opi05135
Yersinia infection
opi05166
Human T-cell leukemia virus 1 infection
opi05170
Human immunodeficiency virus 1 infection
opi05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
opi05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101536290 (CD4)
03260 Virion - Human immunodeficiency virus
101536290 (CD4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
101536290 (CD4)
04514 Cell adhesion molecules
101536290 (CD4)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
101536290 (CD4)
04612 Antigen processing and presentation
101536290 (CD4)
04660 T cell receptor signaling pathway
101536290 (CD4)
04658 Th1 and Th2 cell differentiation
101536290 (CD4)
04659 Th17 cell differentiation
101536290 (CD4)
09160 Human Diseases
09161 Cancer: overview
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
101536290 (CD4)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
101536290 (CD4)
05170 Human immunodeficiency virus 1 infection
101536290 (CD4)
09171 Infectious disease: bacterial
05135 Yersinia infection
101536290 (CD4)
09163 Immune disease
05340 Primary immunodeficiency
101536290 (CD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
opi04090
]
101536290 (CD4)
CD molecules [BR:
opi04090
]
Proteins
101536290 (CD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD4-extracel
C2-set
Tcell_CD4_C
ig
Ig_3
Ig_2
V-set
I-set
Receptor_2B4
Ig_6
zf-UBR
YjfB_motility
Motif
Other DBs
NCBI-GeneID:
101536290
NCBI-ProteinID:
XP_004596444
LinkDB
All DBs
Position
8A:23444980..23450415
Genome browser
AA seq
459 aa
AA seq
DB search
MHRGLCLQYLLLLVLPLALLPAAAWGKTVMLGKAGATSIDLPCESPQKRHALFKWKHSNQ
VKILENQASNFWLKGKSPLSDRVESKKNLWDQGSFPLVIKDLKMEDSGIYICEVESKRFE
VELLVFKLTAQPDTRLLQGQSLTLTLEGRFDESSSVQWKDPRSKVTKGSQIFSVPQVGVQ
DSGTWTCIFSQDKKILELDIKILVLGFQKTLTSVYKAEGEQVEFSFPLNFDNEDLSGELM
WQAEGASSTQSWVAFSLKDKKVSVQQVLPDLKLQMGKELPLHLTLPNISPHSAGSGTLSL
SLANGKLQQQVNLVVMRMIHVNNNLTCKVLGPTAPKTKLSLKLQGLETMVSTQEKTVQVP
NPKVGTWQCVLLSGDQVLLESKTNVEPRGLEQQQPMLLAGVLGGTIGFVLFTGLCIYCCV
KCRHRRHQAQRMSQIKKLLSEKKTCQCPHRRLQKTDSLL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggggactctgtttgcagtacctgctgctgctggtgctgccactggctctactc
ccagcagccgcttggggaaagactgtcatgctaggcaaagctggggccaccagcattgat
ctgccctgtgagagtccccagaagagacacgcattgttcaagtggaaacacagcaaccag
gtcaagatcctggaaaaccaggcctccaacttctggcttaaaggtaagtctcctttgagt
gatcgcgtggagtccaagaaaaacttgtgggaccaaggatcctttccgctggtcatcaag
gacctgaagatggaagactccgggatttatatctgcgaagtagagagcaagagatttgaa
gtggagctactggtattcaaactgaccgcccaaccagacacccgcctgctccaggggcag
tcactgaccctgaccttggagggccgctttgacgagagttcctcggtgcaatggaaggac
ccgaggagtaaagttacaaaaggcagccagattttttccgtgccccaggtgggggtccag
gacagtggcacctggacctgcatcttctcccaagacaagaagatactggagcttgacata
aaaatcttggtgttgggtttccaaaagaccttgacctcagtctacaaggccgagggtgag
caggtggagttctccttcccactcaactttgacaacgaagacctgagcggagagctcatg
tggcaggcagagggggcctcctccacccagtcctgggttgctttctccttgaaggacaag
aaggtgtccgtgcagcaggtgctcccggacctcaagttgcagatgggcaaggaactcccg
ctgcatctcaccctgcccaacatctcgcctcactctgctggttctggaaccttgagctta
tctcttgctaacggaaaattgcagcagcaagtgaacctggtggtgatgagaatgattcat
gtaaacaacaacttgacctgcaaggtgttgggacccactgctcccaagacaaagctgagc
ttgaagctgcagggcttggaaacaatggtctccacgcaggagaagacggtgcaggtgcca
aacccgaaggtggggacatggcagtgtgtgctgctcagcggggaccaggtgctgctggag
tctaagaccaacgttgagcccagggggctggagcagcagcagcccatgctcctggctggc
gtgctggggggcaccataggcttcgtgctcttcactgggctctgtatctactgctgtgtc
aagtgccgccaccgacggcaccaggcacagcggatgtctcagatcaagaagctgctcagt
gagaagaagacctgccagtgtccccaccggcggctgcagaagacggacagtctcctgtga
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