Oryza sativa japonica (Japanese rice) (RefSeq): 107275791
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Entry
107275791 CDS
T01015
Name
(RefSeq) cystathionine beta-lyase, chloroplastic-like
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00270
Cysteine and methionine metabolism
osa00450
Selenocompound metabolism
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
osa01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
107275791
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
107275791
Enzymes [BR:
osa01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
107275791
BRITE hierarchy
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
GDC-P
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
107275791
NCBI-ProteinID:
XP_015641512
UniProt:
A0A0P0WT28
LinkDB
All DBs
Position
6:3861472..3865453
Genome browser
AA seq
384 aa
AA seq
DB search
MKEPSVATILTSFENSFDGFGSMSTPLYQTATFKQPSATDNGPYDYTRSGNPTRDVLQSL
MAKLEKADQAFCFTSGMAALAAVTHLLKSGQEIVAGEDIYGGSDRLLSQVAPRHGIVVKR
IDTTKISEVTSAIGPLTKLVWLESPTNPRLQITDIKKIAEIAHYHGALVLVDNSIMSPVL
SRPLELGADIVMHSATKFIAGHSDLMAGILAVKGESSLAKEIAFLQNAEGSGLAPFDCWL
CLRGIKTMALRVEKQQANAQKIAEFLASHPRVKKVNYAGLPDHPGRSLHYSQAKGAGSVL
SFLTGSLALSKHVVETTKYFNVTVSFGSVKSLISLPCFMSHASIPSAVREERGLTDDLVR
ISVGIEDADDLIADLDHALRSGPA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagcctagcgtggcgacgatactgacgagcttcgagaactcgttcgatgggttc
gggtctatgagcacgccgctgtaccagacggccacgtttaagcagccttcagcaaccgat
aatggaccttatgattacactagaagtggtaaccctacacgtgatgttctccaaagcctt
atggctaagcttgagaaggcggatcaggcattctgcttcaccagtgggatggcagcacta
gctgcagtaacacacctccttaagtctggacaagaaatagttgctggagaggacatatat
ggtggctcagaccgtctgctctcacaagttgccccgagacatgggattgtagtaaaacga
attgatacaaccaaaattagtgaggtaacttctgcaattgggcccttgactaaactagta
tggcttgaaagtcccaccaatccccgtctacaaattactgatataaagaaaatagcagag
atagctcattaccatggtgctcttgttttagtagacaacagcatcatgtctcctgtgctc
tcccgtcctctagaacttggagcagatattgttatgcactcagcaaccaaatttatagct
ggacatagcgatcttatggctggaattcttgcggtgaagggtgaaagcagcttggctaaa
gagattgcatttctacaaaatgctgaaggatcaggtttggcaccatttgattgctggctt
tgtttgagaggaatcaaaaccatggctttgcgggtggagaagcagcaggctaatgctcag
aagattgctgaatttctagcttctcatccaagagtaaagaaagtgaactatgcaggactt
cctgatcatcctggacgatctctacactattcccaggcaaagggagcgggttcagttctc
agtttcctaactggttcattagctctctcaaaacatgttgttgagaccacaaagtacttc
aatgtaacagttagctttggaagtgtgaaatcgctcattagcctgccatgcttcatgtca
cacgccagcatcccttctgcggttcgcgaggagcgcggcctgacagacgatctagtcagg
atatcggttggaattgaggatgccgacgacctcatagcggatcttgatcatgctctccgg
tctggtccagcttag
Oryza sativa japonica (Japanese rice) (RefSeq): 4340283
Help
Entry
4340283 CDS
T01015
Name
(RefSeq) cystathionine beta-lyase, chloroplastic isoform X1
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa00270
Cysteine and methionine metabolism
osa00450
Selenocompound metabolism
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
osa01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
4340283
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
4340283
Enzymes [BR:
osa01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
4340283
BRITE hierarchy
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
GDC-P
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
4340283
NCBI-ProteinID:
XP_015641397
LinkDB
All DBs
Position
6:3823012..3827397
Genome browser
AA seq
476 aa
AA seq
DB search
MSAAAAAAAAAAIPTSLGRLFHLRPTPNPSRNLSGSSAQPLLRLSYHPRLTLSRRMEAPA
AIADSHGGGDLSASAVGAEALGAVAAPDFDVEMKEPSVATILTSFENSFDGFGSMSTPLY
QTATFKQPSATDNGPYDYTRSGNPTRDVLQSLMAKLEKADQAFCFTSGMAALAAVTHLLK
SGQEIVAGEDIYGGSDRLLSQVAPRHGIVVKRIDTTKISEVTSAIGPLTKLVWLESPTNP
RLQITDIKKIAEIAHYHGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDLMAG
ILAVKGESSLAKEIAFLQNAEGSGLAPFDCWLCLRGIKTMALRVEKQQANAQKIAEFLAS
HPRVKKVNYAGLPDHPGRSLHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFNVTVSFGS
VKSLISLPCFMSHASIPSAVREERGLTDDLVRISVGIEDADDLIADLDHALRSGPA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgccgccgccgccgccgccgccgccgcaatccccacctctctcggccgcctc
ttccacctccgccccaccccgaacccctcccggaaccttagcggcagctcagcgcaaccc
ctcctccgcctcagctaccacccacgcctcacgctctctcgccgcatggaggcgccggcg
gcgatcgccgactcccacggcggcggcgacctgagcgcgtccgcggtcggcgcggaggcg
ctgggcgccgtcgccgctccggatttcgatgtggagatgaaggagcctagcgtggcgacg
atactgacgagcttcgagaactcgttcgatgggttcgggtctatgagcacgccgctgtac
cagacggccacgtttaagcagccttcagcaaccgataatggaccttatgattacactaga
agtggtaaccctacacgtgatgttctccaaagccttatggctaagcttgagaaggcggat
caggcattctgcttcaccagtgggatggcagcactagctgcagtaacacacctccttaag
tctggacaagaaatagttgctggagaggacatatatggtggctcagaccgtctgctctca
caagttgccccgagacatgggattgtagtaaaacgaattgatacaaccaaaattagtgag
gtaacttctgcaattgggcccttgactaaactagtatggcttgaaagtcccaccaatccc
cgtctacaaattactgatataaagaaaatagcagagatagctcattaccatggtgctctt
gttttagtagacaacagcatcatgtctcctgtgctctcccgtcctctagaacttggagca
gatattgttatgcactcagcaaccaaatttatagctggacatagcgatcttatggctgga
attcttgcggtgaagggtgaaagcagcttggctaaagagattgcatttctacaaaatgct
gaaggatcaggtttggcaccatttgattgctggctttgtttgagaggaatcaaaaccatg
gctttgcgggtggagaagcagcaggctaatgctcagaagattgctgaatttctagcttct
catccaagagtaaagaaagtgaactatgcaggacttcctgatcatcctggacgatctcta
cactattcccaggcaaagggagcgggttcagttctcagtttcctaactggttcattagct
ctctcaaaacatgttgttgagaccacaaagtacttcaatgtaacagttagctttggaagt
gtgaaatcgctcattagcctgccatgcttcatgtcacacgccagcatcccttctgcggtt
cgcgaggagcgcggcctgacagacgatctagtcaggatatcggttggaattgaggatgcc
gacgacctcatagcggatcttgatcatgctctccggtctggtccagcttag
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integrated database retrieval system