Oryza sativa japonica (Japanese rice): 4323849
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Entry
4323849 CDS
T01015
Name
(RefSeq) anthocyanin regulatory R-S protein
KO
K28363
basic helix-loop-helix transcription factor family protein
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4323849
Transcription factors [BR:
osa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
4323849
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Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH-MYC_N
bHLH-TF_ACT-like_plant
HLH
bHLH_IRO3
bHLH_SAC51
bHLH_INO4
Motif
Other DBs
NCBI-GeneID:
4323849
NCBI-ProteinID:
XP_015638330
LinkDB
All DBs
Position
1:join(22786651..22786790,22788640..22788903,22789726..22789825,22790122..22790136,22790264..22790320,22808128..22808718,22808847..22809227,22812412..22812483)
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AA seq
539 aa
AA seq
DB search
MMASAPSAQEEPLQPGTMQFRKQLAAAVRSISWTYAIFWSISTTRPGVLTWKDGFYNGEV
KTRKIGSSTMELTAEQLLLQRSEQLRELYSSLLSGECADQQRRRRPVTALSPEDLGNMEW
FYMVCMTYAFRPGQCLPGKSFASNGCAWLCNAQSADSKAFPRKLLARYNASIQTIVCVPF
MNGVLELGTTDPVPEEPNVVNRITTAFWEFQLLACSDEPISSGTPSSPSSPLTKETGDAN
TVLIDDLFLAHSDAILAGGDQEDHQLGNDLGQQQAATAMEIDDDMIYSLIRNWDNDSSSS
WIELLDHVVVSPASCFVPWKRTELDKQAVAGGGEAAQRLLKKAVGGGGAWMNRAAGSSIK
NHVMSERRRWEKLNEMFLTLKSLVPSIDKVDKASSLAETIAYLKELERRVQELESGKKVS
RPAKRKPCSERIIGGGDAGAVKEHHHWVLSESQEGTPSNVRVIVMDKDELHLEVHCRWKE
LMMTRLFDAIKSLRLDVLSVQASAPNGLLGLKIRAKYAISAAVAPAMISETLRTAVAGN
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgatggcatctgctccttcagctcaagaagaacccctacagccagggacgatgcaattc
aggaagcagcttgctgctgccgtgaggagcatcagttggacctatgccatcttttggtcc
atttcaactactcgtccaggagtcctaacatggaaggacgggttctacaacggcgaggtt
aagacgaggaagataggcagttcgacgatggagctcacggctgagcagctcctcctgcag
agaagcgagcaactgagggagctgtacagctctctcctctccggcgagtgtgcagaccag
cagaggaggaggaggcctgtcaccgcgctgtcgccggaggatctcggcaacatggaatgg
ttctacatggtctgcatgacctatgcgttccggcctggacaatgtttgccaggtaaaagc
tttgcaagcaatggatgtgcctggctgtgcaacgctcagtctgctgatagcaaagccttt
ccacgcaagctcttagccaggtacaacgcttctattcagacaattgtctgcgtccccttc
atgaatggcgtacttgagcttgggaccactgatccggttccggaggaaccaaatgtggta
aaccgaatcaccacggctttctgggagtttcaacttctggcatgctcagacgagccaatt
agctctggtaccccttcttccccatcatcgccgctgacgaaagaaactggagacgccaac
accgtgctcatcgacgacctcttcctcgcccacagcgatgcgatactagcaggaggagat
caagaagatcatcagctaggcaacgacctcgggcaacaacaagcagccaccgccatggag
atcgacgatgatatgatctacagcctgatcaggaactgggataacgacagcagcagcagc
tggatcgagctcctggaccacgtcgttgtctctcccgcctcgtgctttgtgccttggaag
agaacggagctggacaagcaggcggtggccggcggcggggaggcggcgcagaggttgctg
aagaaagccgtgggcggcggcggcgcatggatgaatcgtgccgctggtagcagcatcaag
aaccatgtcatgtccgagagaaggcgctgggagaagctgaatgagatgttcctcactctc
aaatcactggtcccgtccatcgacaaggtggacaaagcatccagccttgctgagacgata
gcctacctcaaggagctggagaggagggtgcaagagctcgagtccgggaagaaggtgtct
aggccggccaagaggaagccgtgctcggagaggatcatcggcggcggcgatgccggagct
gttaaagagcaccaccactgggtgctctccgagtcccaggagggcaccccaagcaatgtg
cgtgtgatcgtcatggacaaggatgagctgcacctggaggtgcactgccggtggaaggag
ctgatgatgacacggttgttcgacgccatcaagagcctccgtcttgatgttctctcggtg
caggcgtcggcaccgaatggtcttctcggactgaagatacgagctaagtatgccatttca
gccgccgtggcgcctgcgatgatcagtgaaactctccggacagccgtagcaggcaactaa
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