KEGG   Oryza sativa japonica (Japanese rice): 4325312
Entry
4325312           CDS       T01015                                 
Symbol
OsRan1, P0046B10.3, ran, RAN1, TC4
Name
(RefSeq) gTP-binding nuclear protein Ran-1
  KO
K07936  GTP-binding nuclear protein Ran
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03008  Ribosome biogenesis in eukaryotes
osa03013  Nucleocytoplasmic transport
osa03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    4325312 (OsRan1)
   03008 Ribosome biogenesis in eukaryotes
    4325312 (OsRan1)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    4325312 (OsRan1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4325312 (OsRan1)
   03009 Ribosome biogenesis [BR:osa03009]
    4325312 (OsRan1)
   03016 Transfer RNA biogenesis [BR:osa03016]
    4325312 (OsRan1)
   03036 Chromosome and associated proteins [BR:osa03036]
    4325312 (OsRan1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:osa04147]
    4325312 (OsRan1)
   04031 GTP-binding proteins [BR:osa04031]
    4325312 (OsRan1)
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     4325312 (OsRan1)
Ribosome biogenesis [BR:osa03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    4325312 (OsRan1)
  Pre-60S particles
    4325312 (OsRan1)
Transfer RNA biogenesis [BR:osa03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    4325312 (OsRan1)
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     4325312 (OsRan1)
   Spindle formation proteins
    4325312 (OsRan1)
Exosome [BR:osa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   4325312 (OsRan1)
GTP-binding proteins [BR:osa04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    4325312 (OsRan1)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RNA_helicase GTP_EFTU Pox_A32 ATPase AAA_24 ArgoMid Septin AAA_16 AAA_7 AAA_22
Other DBs
NCBI-GeneID: 4325312
NCBI-ProteinID: NP_001393166
LinkDB
Position
1:join(24762761..24762763,24762874..24762943,24763452..24763508,24763597..24763714,24764293..24764382,24764458..24764637,24764723..24764800,24764891..24764960)
AA seq 221 aa
MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEVSAKSNYNFEKPFLYLARKLAGDGNLHFV
ETPALAPPDVTIDLAAQQQHEAELAAAAAQPLPDDDDDLIE
NT seq 666 nt   +upstreamnt  +downstreamnt
atggcgctcccgaatcagcagacggtggactaccccagcttcaagctcgtcatcgtcggc
gacggcggcacgggcaaaaccacctttgtgaagaggcatttgactggcgagttcgagaag
aagtatgagcctactatcggtgtggaggtccaccccttggatttcttcactaactgcggc
aagatccgcttctactgctgggatacagctggtcaggagaaatttggtggactcagggat
ggttactatatccatgggcagtgtgctatcataatgttcgatgttacttctcggctgacg
tacaagaatgtcccaacttggcaccgtgatttatgcagggtctgtgaaaacatcccaatt
gtgctctgtggtaacaaggttgatgtgaagaacaggcaggttaaagcaaagcaggttacc
ttccataggaagaagaacttgcagtactatgaggtgtcagctaagagcaactacaacttt
gagaagccattcctgtaccttgccaggaaacttgctggcgatggtaacctccactttgtg
gaaacacctgctcttgctcctccagatgtcacaattgatctagcagcccagcaacagcac
gaggctgaactggcagcggctgcagcccaaccactgccagatgatgacgatgacctgatc
gagtag

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