Oryza sativa japonica (Japanese rice): 4327845
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Entry
4327845 CDS
T01015
Name
(RefSeq) sphingosine kinase 2 isoform X2
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00600
Sphingolipid metabolism
osa01100
Metabolic pathways
osa04148
Efferocytosis
Module
osa_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
4327845
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
4327845
Enzymes [BR:
osa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
4327845
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Gene cluster
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Motif
Pfam:
DAGK_cat
YegS_C
CERK_C
Motif
Other DBs
NCBI-GeneID:
4327845
NCBI-ProteinID:
XP_015646411
UniProt:
Q0JIR8
A0A0P0V906
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All DBs
Position
1:complement(join(33751969..33752166,33752334..33752456,33755106..33755381,33755966..33756036,33756130..33756207,33756310..33756396,33756481..33756553,33757364..33757464,33757578..33757700,33757882..33758275))
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AA seq
507 aa
AA seq
DB search
MGDHRATAKVRVNGAPAEATLFCTDPPGAANGGGGDGGELRWRCAGGAAAERVLSLDADV
LGVEARGKEVVVKAFVLPADAAARSVSCAAGAGKGGGGRRRRRRDYVFEMAAGEDAAAAW
CDRMRGSLDSLGRPKRLFILVNPFGGKKCGKKIYEAEIKPLFEAAGVNVTMQETRYQGHA
RQVASSLDLARYDGIVCVSGDGVLVEVVNGILQRMDWEEAMKIPIGVVPAGTGNGMAKSL
LHSASKTYSVPNAVFAIIRGYSQSLDVCTIVQGRKKFFSVLNMTWGLVADIDIESEKYRW
MGSARFDFYALVRIMNLRKYYGSIQYVPAPGYEAYGDVVKQVENCTVECQEQIGKSLCSY
QGPSVEFQGSEWRSLDGPFVSIWINNVQWAAESIMAAPGAKFSDGYMDAVIVRDCPKADL
LALLMKMGDGSHVKSPYVTYLKVRCLRLSPGQLVENPKRGGIIDVDGEAIARGEGTYGKN
QKQDVMGYGPSIQMTVHRALATMYCPK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgggagaccaccgcgccacggccaaggtccgcgtgaacggcgcgccggcagaagcgacg
ctcttctgcaccgacccgccgggtgcagctaatggcggcggcggagatggaggggagctc
cggtggcggtgcgctggtggcgccgcggcggagcgcgtgctgtcgctggacgcggacgtg
ctcggggtcgaggccaggggtaaggaggtggtcgtgaaggccttcgtgctgccggcggac
gcggcggccaggtcggtgtcctgcgccgcgggtgcggggaagggaggaggaggacggagg
aggcgcaggagggattacgtgttcgagatggccgccggcgaggacgccgccgcggcctgg
tgcgacaggatgaggggctccctggactctctcggccggcctaagagattgttcatcctg
gtcaaccccttcggcggcaaaaaatgcggaaagaagatttacgaggcagagatcaagccc
ctgttcgaggccgccggtgtcaacgtcacaatgcaagagacccggtatcaggggcacgcc
cggcaggtggcgtcttctcttgaccttgcgcgctacgatggcattgtctgtgtcagcggc
gatggtgtcctcgtggaggtagtaaatggaattctacaacgaatggattgggaggaagcg
atgaagataccgattggggtggttccagcaggtacaggaaatggcatggctaaatcgctg
ttgcattctgccagtaagacatactcggttccaaatgccgtatttgccattatcagaggt
tacagtcagtccttggatgtatgcaccattgtgcagggaaggaagaaatttttcagtgtc
ttgaatatgacttggggtttggtggctgatatagatattgagtctgagaagtacaggtgg
atgggaagtgcacgctttgatttctatgctttggttcgcataatgaacttgagaaaatac
tacggaagtattcagtatgttcctgcccccggctatgaggcatatggagatgtcgtcaag
caggttgagaattgcactgtagaatgccaagaacagattgggaagtctttgtgttcttat
caaggtccttccgttgagtttcaaggttcagaatggagatcccttgatggtccatttgtg
tctatttggatcaacaacgtgcaatgggctgctgagagtatcatggcagctcctggggcc
aagttctcagatggctacatggatgcagtcatagtcagggactgtccaaaggctgatctt
ttagccctactgatgaagatgggcgatgggagtcatgtaaaatcaccatacgttacgtat
ctaaaggtgagatgtcttcggttatcaccaggccagcttgtggagaatccaaaacgaggt
ggcataatagacgtggacggggaggctatcgctagaggagaaggaacgtacggcaaaaac
cagaaacaggacgtgatgggttatggcccttccattcagatgacagtgcaccgagcgttg
gccacaatgtattgtcccaaatga
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