Oryza sativa japonica (Japanese rice): 4330040
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Entry
4330040 CDS
T01015
Symbol
PAL06, ZB8
Name
(RefSeq) phenylalanine ammonia-lyase
KO
K10775
phenylalanine ammonia-lyase [EC:
4.3.1.24
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00360
Phenylalanine metabolism
osa00940
Phenylpropanoid biosynthesis
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
Module
osa_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
osa_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09105 Amino acid metabolism
00360 Phenylalanine metabolism
4330040 (PAL06)
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
4330040 (PAL06)
Enzymes [BR:
osa01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.24 phenylalanine ammonia-lyase
4330040 (PAL06)
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Gene cluster
GFIT
Motif
Pfam:
Lyase_aromatic
Motif
Other DBs
NCBI-GeneID:
4330040
NCBI-ProteinID:
NP_001403678
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Position
2:complement(join(25492838..25494584,25494704..25495098))
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AA seq
713 aa
AA seq
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MECENGRVSANGMSGLCVAAPRADPLNWGKATEEMTGSHLDEVKRMVAEYRQPLVKIEGA
SLRIAQVAAVAAAGEARVELDESARERVKASSDWVMNSMMNGTDSYGVTTGFGATSHRRT
KEGGALQRELIRFLNAGAFGTGTDGHVLPAEATRAAMLVRINTLLQGYSGIRFEILEAIA
KLLNANVTPCLPLRGTITASGDLVPLSYIAGLVTGRENAVAVAPDGSKVNAAEAFKIAGI
QGGFFELQPKEGLAMVNGTAVGSGLASTVLFEANILAILAEVLSAVFCEVMNGKPEYTDH
LTHKLKHHPGQIEAAAIMEHILEGSSYMKHAKKLGELDPLMKPKQDRYALRTSPQWLGPQ
IEVIRAATKSIEREINSVNDNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLAIAAIGKLM
FAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSA
EQHNQDVNSLGLISSRKTDEAIDILKLMSSTFLIALCQAVDLRHIEENVKSAVKSCVMTV
AKKTLSTNSTGDLHVARFCEKDLLKEIDREAVFAYADDPCSHNYPLMKKLRNVLVERALA
NGAAEFNADTSVFAKVAQFEEELRATLPGAIEAARAAVENGTAAIPSRITECRSYPLYRF
VREELGTKYLTGEKTRSPGEELNKVLVAINEGKHIDPLLECLKEWNGEPLPIC
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcgagaacggccgcgtttctgccaatggcatgagtggtctctgcgtcgcggcg
ccccgcgccgacccgctgaactgggggaaggccacggaggagatgacggggagccacctc
gacgaggtgaagaggatggtggcggagtaccgccagcctctggtcaagatcgagggcgct
agcctgaggatcgcgcaggtcgccgcggtggccgcggccggcgaggccagggtggagctc
gacgagtcggcccgcgagcgcgtcaaggccagcagcgactgggtgatgaacagcatgatg
aacggcacggacagctacggtgtcaccaccggtttcggcgccacgtcccacaggaggacc
aaggagggtggtgctctgcaaagagagctcatcagattcctcaatgccggcgcgttcggc
actggcaccgacggtcatgttttgccggcggaggcaacccgcgcggcaatgctcgtccgc
atcaacacactcctccagggatactccggcatccggttcgagatcctcgaggcgatcgcc
aagctgctcaacgcgaacgtcacaccgtgcctgccgctccggggcacgatcaccgcctcc
ggtgacctcgtcccgctgtcctacattgccggccttgtcactgggcgcgagaacgccgtg
gcggttgcaccagatggcagcaaggtgaacgccgctgaggcgttcaagattgctggcatc
cagggcggcttcttcgagctgcagcccaaggaaggccttgccatggtcaatggcactgcc
gtgggctctggccttgcatcgaccgtgctctttgaggctaacattcttgccatcctcgcc
gaggtcctctcggccgtgttctgcgaggtgatgaacggcaagccggagtacaccgaccac
ctgactcacaagctcaagcaccatccaggacagatcgaggccgccgccatcatggagcac
atcttggagggaagctcctacatgaagcatgccaagaagcttggtgagctcgacccactg
atgaagccgaagcaagaccggtacgcgctccggacatccccacagtggctcggccctcaa
attgaggttatccgcgccgccaccaagtccatcgagcgtgagatcaactccgtgaacgac
aacccgctcatcgacgtctcccgcggcaaggcgctgcacggtggcaacttccagggcacg
cccatcggcgtgtccatggacaacacccgcctcgccatcgctgccatcggcaagctcatg
ttcgcgcagttctcggagctcgtgaacgacttctacaacaacggcctgccatccaacctg
tctggcggtcgcaacccgagcttggactacgggttcaagggcgccgagatcgccatggcc
tcctactgctccgagctgcagttcttgggcaacccagtgaccaaccacgtccagagcgcc
gagcagcacaaccaggacgtcaactctcttggactcatctcctccaggaagaccgacgag
gcaatcgacatcctgaagctcatgtcctccacgttcttgatcgccctctgccaggccgtc
gacctgcggcacatcgaggagaacgtcaagagcgccgtcaagagctgcgtcatgacggtg
gccaagaagacactcagcaccaactccaccggcgatctccacgtcgcacgcttctgcgag
aaggacctgctcaaggagatcgaccgcgaggcggtgttcgcgtacgcggacgacccgtgc
agccacaactacccgctgatgaagaagctgcgcaacgtgctcgtggagcgcgccctcgcc
aacggcgcggccgagttcaacgccgacacctcggtgttcgccaaggtcgcgcagttcgag
gaggagctgcgcgcgactctgccaggtgcgatcgaggccgcacgtgcggctgtggagaac
ggcacggcggcgattcccagcagaatcaccgagtgcaggtcgtatccgctctaccggttc
gtgcgcgaggagctcggaacaaagtacctgaccggcgagaagacacgatcgcctggcgag
gagctgaacaaggttcttgtggctatcaacgaaggcaagcacatcgacccgttgctcgag
tgcctcaaggagtggaacggcgagcccctgccaatctgctga
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