KEGG   Oryza sativa japonica (Japanese rice): 4330476
Entry
4330476           CDS       T01015                                 
Name
(RefSeq) uncharacterized protein
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03420  Nucleotide excision repair
osa04120  Ubiquitin mediated proteolysis
osa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    4330476
   04120 Ubiquitin mediated proteolysis
    4330476
  09124 Replication and repair
   03420 Nucleotide excision repair
    4330476
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    4330476
   03400 DNA repair and recombination proteins [BR:osa03400]
    4330476
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     4330476
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   4330476
  Multi subunit type E3
   SCF complex
    Ring finger protein
     4330476
   Cul2 complex
     4330476
   Cul3 complex
     4330476
   Cul4 complex
     4330476
   Cul7 complex
     4330476
   Cul8 complex
     4330476
   Cul9 complex
     4330476
DNA repair and recombination proteins [BR:osa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      4330476
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      4330476
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 4330476
NCBI-ProteinID: XP_015625781
UniProt: Q6YV20 Q8S3S0
LinkDB
Position
2:join(29776588..29776711,29776827..29776877,29777008..29777067,29778628..29778699,29778789..29778826)
AA seq 114 aa
MDKGDVAVAVPPSIAGASSSGAKKGKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCI
ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 345 nt   +upstreamnt  +downstreamnt
atggacaagggcgacgtcgccgtggccgtgcccccctccatcgccggcgcctcctcctcc
ggggccaagaagggcaagcgcttcgagatcaagaagtggaacgctgtctccctctgggcc
tgggacatcgtcgtggacaactgcgccatctgccgcaaccacatcatggacctctgcatc
gagtgccaggcgaaccaggcgagcgccaccagcgaggagtgcaccgtcgcttggggagtt
tgcaaccatgcattccacttccactgcatcagccgttggctcaagacccgtcaagtgtgc
cctctagacaacagcgagtgggagttccagaagtatggtcactag

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