Oryza sativa japonica (Japanese rice): 4331606
Help
Entry
4331606 CDS
T01015
Name
(RefSeq) E3 ubiquitin-protein ligase RZFP34 isoform X2
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
4331606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4331606
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4331606
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
4331606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-C3HC4_4
zf-RING_4
DmmA-like_C
Peptidase_C4
FUSC-like
Motif
Other DBs
NCBI-GeneID:
4331606
NCBI-ProteinID:
XP_015628711
LinkDB
All DBs
Position
3:join(2557424..2557720,2558001..2558098,2558215..2558302,2558397..2558456,2559695..2559727,2559856..2559933,2560058..2560101,2560186..2560226,2560310..2560392,2560479..2560570,2560654..2560723,2560831..2560872,2560962..2561099)
Genome browser
AA seq
387 aa
AA seq
DB search
MLRDPLSPSFFSSSLNRAAPRLPKYITVGAAVRRAVRAAGAGRARARSLGQSVSLREERG
DPWQAWRTTRCRPSAAAAAAAVSCRGREIIGLAGGRRTQVLRATIPENSVSGSSVRGKLR
EMEMDLAVEQYGCVHYRRKCKIRAPCCGEIFDCRHCHNEAKDSLEVSISDRHEIPRHEIK
LVICSLCNKEQDVQQDCSNCGACLGKYFCAKCNFYDDDVSKNQFHCDGCGICRTGGAENF
FHCDKCGCCYSYVLKDSHHCVERAMHHNCPVCFEYLFDSTKDISALHCGHTIHLECLYEM
RSHQQFSCPVCLRSACDMSHAWQKLDQEVAASPMPVIYQKKMIWILCNDCGTTSNVQFHI
LGHKCPGCSSYNTRQTRAAPAAACSRV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgctacgcgaccccctctccccctcgtttttctcctcttctttaaaccgcgccgcgccg
cgcctacccaaatatataaccgtgggtgcagccgtgcgccgagccgtgcgtgcagcaggc
gcaggccgtgctcgtgctcgctcgctcgggcagtcggtctccctccgcgaggagagagga
gacccttggcaagcgtggaggacgactcggtgccggccgagtgcggctgctgctgctgcg
gctgtctcctgccgtggccgcgaaatcatcgggttggccggtggtcggcgcacgcaggtg
ctaagagctacaatacctgagaattcagttagtggatcatcagttcgaggaaagctgcga
gaaatggagatggacttggcagtcgagcagtacggatgcgtgcattacaggaggaaatgc
aagataagggcgccctgctgcggcgagatcttcgattgcaggcactgccacaacgaagcg
aaggactcgttggaggtcagcatcagcgaccggcacgagatccctcgccatgaaatcaag
ctggttatctgctctctctgcaacaaagaacaggatgtacaacaggattgctccaattgt
ggggcatgcttgggtaaatatttctgcgcaaaatgcaacttttatgatgacgatgtatca
aagaaccaatttcactgcgatggatgtggcatatgcagaactggtggtgcagagaacttc
tttcactgtgacaaatgcggatgctgctacagctatgtgctgaaggattcccatcattgt
gtggaaagagcaatgcaccataactgccctgtatgcttcgagtatctatttgactcaaca
aaagacatcagtgcactgcactgcggacacacgatccatctggaatgcctatacgagatg
agatcccatcaacaattctcttgcccggtctgcctgaggtctgcttgtgacatgtcccat
gcatggcaaaagcttgatcaagaggttgcagcatcgccgatgccagtgatctatcagaag
aaaatgatatggatcctatgcaacgactgtgggacgacatcgaacgtgcaattccacata
ttgggacacaagtgccccggatgcagctcttacaacacccggcagacaagagccgcccct
gctgccgcgtgctccagagtctga
DBGET
integrated database retrieval system
