Entry
Symbol
PDS, PDS1
Name
(RefSeq) 15-cis-phytoene desaturase, chloroplastic/chromoplastic isoform X2
KO
Organism
osa Oryza sativa japonica (Japanese rice)
Pathway
osa01110 Biosynthesis of secondary metabolites
Module
osa_M00097 beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:osa00001 ]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
4331854 (PDS)
Enzymes [BR:osa01000 ]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.5 15-cis-phytoene desaturase
4331854 (PDS)
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Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
3:join(4420832..4421035,4421110..4421242,4421357..4421445,4421594..4421651,4422137..4422292,4422511..4422659,4423163..4423282,4423468..4423681,4423768..4423870,4423977..4424024,4424222..4424267,4424602..4424789,4424898..4425060,4425182..4425247)
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AA seq
578 aa AA seq DB search
MDTGCLSSMNITGTSQARSFAGQLPTHRCFASSSIQALKSSQHVSFGVKSLVLRNKGKRF
RRRLGALQVVCQDFPRPPLENTINFLEAGQLSSFFRNSEQPTKPLQVVIAGAGLAGLSTA
KYLADAGHKPILLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNIQNLFGELGINDR
LQWKEHSMIFAMPNKPGEFSRFDFPETLPAPLNGIWAILRNNEMLTWPEKVKFALGLLPA
MVGGQAYVEAQDGFTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNR
FLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEVRLNSRIQKIELNPDGTVKHFALTD
GTQITGDAYVFATPVDILKLLVPQEWKEISYFKKLEKLVGVPVINVHIWFDRKLKNTYDH
LLFSRSSLLSVYADMSVTCKEYYDPNRSMLELVFAPAEEWVGRSDTEIIEATMQELAKLF
PDEIAADQSKAKILKYHVVKTPRSVYKTIPDCEPCRPLQRSPIEGFYLAGDYTKQKYLAS
MEGAVLSGKLCAQSVVEDYKMLSRRSLKSLQSEVPVAS
NT seq
1737 nt NT seq +upstream nt +downstream nt
atggatactggctgcctgtcatctatgaacataactggaaccagccaagcaagatctttt
gcgggacaacttcctactcataggtgcttcgcaagtagcagcatccaagcactgaaaagt
agtcagcatgtgagctttggagtgaaatctcttgtcttaaggaataaaggaaaaagattc
cgtcggaggctcggtgctctacaggttgtttgccaggactttccaagacctccactagaa
aacacaataaactttttggaagctggacaactatcttcatttttcagaaacagtgaacaa
cccactaaaccattacaggtcgtgattgctggagcaggattagctggtttatcaacggca
aaatatctggcagatgctggtcataaacccatattgcttgaggcaagggatgttttgggt
ggaaagatagctgcttggaaggatgaagatggagattggtatgaaactgggcttcatatc
ttttttggagcttatcccaacatacagaacttgtttggcgagcttggtattaatgatcgg
ttgcaatggaaggaacactccatgatatttgccatgccaaacaagccaggagaattcagc
cggtttgattttcctgaaacattgcctgcacccttaaatggaatatgggccatactaaga
aacaatgaaatgctaacttggccagagaaggtgaagtttgctcttggacttttgccagca
atggttggtggccaagcttatgttgaagctcaagatggttttactgtttctgagtggatg
aaaaagcagggtgttcctgatcgagtgaacgatgaggttttcattgcaatgtcaaaggca
cttaatttcataaatcctgatgagttatccatgcagtgcattctgattgctttaaaccga
tttcttcaggagaagcatggttctaagatggcattcttggatggtaatcctcctgaaagg
ttatgcatgcctattgttgaccatgttcgctctttgggtggtgaggttcggctgaattct
cgtattcagaaaatagaacttaatcctgatggaacagtgaaacactttgcacttactgat
ggaactcaaataactggagatgcttatgtttttgcaacaccagttgatatcttgaagctt
cttgtacctcaagagtggaaagaaatatcttatttcaagaagctggagaagttggtggga
gttcctgttataaatgttcatatatggtttgatagaaaactgaagaacacatatgaccac
cttcttttcagcaggagttcacttttaagtgtttatgcggacatgtcagtaacttgcaag
gaatactatgatccaaaccgttcaatgctggagttggtctttgctcctgcagaggaatgg
gttggacggagtgacactgaaatcatcgaagcaactatgcaagagctagccaagctattt
cctgatgaaattgctgctgatcagagtaaagcaaagattctgaagtatcatgttgtgaag
acaccaagatctgtttacaagactatcccggactgtgaaccttgccgacctctgcaaaga
tcaccgattgaagggttctatctagctggtgactacacaaagcagaaatatttggcttcg
atggagggtgcagttctatctgggaagctttgtgctcagtctgtagtggaggattataaa
atgctatctcgtaggagcctgaaaagtctgcagtctgaagttcctgttgcctcctag