Oryza sativa japonica (Japanese rice): 4332448
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Entry
4332448 CDS
T01015
Name
(RefSeq) protein SIEL isoform X1
KO
K13141
integrator complex subunit 4
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4332448
Spliceosome [BR:
osa03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
4332448
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GFIT
Motif
Pfam:
HEAT
HEAT_2
PDS5
HEAT_EZ
Cnd3
Cnd1
TNFR_ELAPOR1_6th
Motif
Other DBs
NCBI-GeneID:
4332448
NCBI-ProteinID:
XP_015628416
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All DBs
Position
3:complement(join(9697499..9698396,9698517..9698962,9699445..9699531,9699736..9699876,9700680..9700871,9700951..9701184,9701576..9701659,9701789..9702166))
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AA seq
819 aa
AA seq
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MEEPPLLASTSRATASVASSSSANCPDPMDEGPSVSVPGLPFAEQLRAAGRGASSGSPGG
PEAQVQALASISRGIYPLARAEALRGLAAVLETADAPGGVVELCHGCAVGLMRDEDEGVR
LASVRLIALCADKLNTREGSDGNGDNQTDIMFLQLSSMARDMCTNVRIEAFNALGKMQRV
SEGVLLQSLSKKVIKPNTGSGSIIKGEKVPPKLIYPCAAGIFAHGIEDEFHQVRTAACKS
LGALSKLSAQYAQKALDLLMGMMNDDTEAVRLQTLQALFHMATYGCLTVQEMHMHMFLGL
LVDMNASIRDATRKILGLVNLPKLQMFKSAIDVLITSLEKHQEEQEIYSVLFSVGKNHGN
FSANIAKHLAKEISMPSDGELILDKPRIKALLIVSISVAFSDDKHNKRDIPEVIFSHAIS
LLGKISCAIGEVVDQNSLLSYFCQRTGIPFWETKLPSRESEGCSVETVADIRPRIEKTVK
STKCLDEVLTMQSVKSIIETVERTWTIRKSCNIRDVRNILRTCKEELRILASNSSGSTGA
FLSFLCEYLDAVQFIVEILRSFQLDNSYDLGPTSPDILLEKLDTSIRRMKCCYAGFNRGM
EIQVCELALLANLFGLSKVGIQSKLVLDKLHWMINRLDCLCADGSCELSYFSREIKKAFD
ANFVGHDIFTLLELFHPKPTTDYGMLKTISADLQVRDNDPENSSTYVCGLPVAVSLYISL
CNISSQDRLWLRMIVGESIQHTFLELSSFGGNDEVKSCSTIIPFYATPMACSFVLRTCLV
MECPYGSVSIRQECNRGPSGSIIELSDELDVYFVCTKRR
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggaagagccaccactccttgcctccacctcacgcgccaccgcctccgtcgcctcctcc
tcctccgcaaactgccccgaccccatggacgagggaccctccgtgtcagttcccggcctg
cccttcgccgagcagcttagggctgcggggcggggcgcgtccagcggctctccggggggg
cccgaggcgcaggtccaggcgctcgcctcgatatcccgcgggatctacccgttggcgagg
gccgaggcgctccgcggccttgccgcggtcctcgagacggcggacgcccccggcggggtt
gtggagctgtgccacggatgcgcggtggggctgatgagggacgaagacgagggcgtcagg
ttggcctccgtgcgattgatagctctatgtgcggataagttgaatacgagagaaggatcg
gatggaaatggcgataaccaaacagacattatgttccttcagcttagctccatggctagg
gacatgtgtacaaatgtaagaattgaagcattcaatgcacttggtaaaatgcagagagtt
tctgagggtgttttgcttcagtcactgtctaagaaggtcataaaacccaacactgggagt
ggttctatcatcaagggagaaaaagtacctcctaaattaatatatccctgcgctgccggc
atttttgcgcatggtattgaagatgagttccatcaggtgcggacagctgcctgtaaatca
ttgggagcactttcaaaactctctgctcaatacgcacagaaagccctggacttattgatg
ggcatgatgaatgatgatacagaagcagttaggctgcagactttgcaggccttattccat
atggcaacatatggatgtttgactgtgcaggagatgcacatgcatatgttccttggtttg
ttggttgacatgaatgcctcgatccgagatgcaacacgcaagatcctaggtttagtcaat
ctgcctaaacttcaaatgttcaaatctgcaatcgatgttctcattacaagtttggaaaaa
catcaagaggaacaagaaatatacagtgttcttttttccgttggtaagaatcatgggaat
ttttcagccaatatagctaagcatttggccaaagagatcagtatgccatctgatggagag
ctgatcttggacaaacccaggataaaagcattgttaatagtgtctatctctgtagctttc
tctgatgataaacacaacaaacgggatatacctgaggttatcttttcacatgcaatttcc
ctactgggaaagatctcttgtgcaataggagaagtagttgatcagaattcactcttatcc
tacttttgtcaaagaactggaattccattttgggaaacaaagttgccgtctagagaatct
gaaggatgtagtgttgagacagtggctgacattcgtcctcggatagaaaaaactgtaaag
tcaactaaatgtttagatgaagttctgacgatgcaatcagttaagtccataatagaaaca
gttgaaaggacttggactatcagaaagtcgtgcaatattcgtgatgttcgaaatattcta
agaacatgcaaggaggaactaagaatattagcttcaaattcttctggatcaactggagca
ttcttgagctttttgtgtgagtatcttgatgcagtacaatttattgtagaaatattacga
tcgtttcaattggataattcatatgaccttggcccaacttcacctgatattttactggag
aagttagatacatctataagaaggatgaagtgttgttatgctggattcaataggggaatg
gagattcaagtctgtgagcttgctttgttggcgaatttatttggactttcaaaggttggg
attcagtcgaaactagtgctggataagttgcattggatgattaatcgtttagattgtctg
tgtgctgatggatcatgcgagctttcttacttcagcagagaaattaagaaagcctttgat
gctaactttgttggccatgatattttcactttgctcgagctctttcatccaaaaccaaca
acagattatggaatgctgaaaacaataagcgcggatttgcaagtaagagacaatgaccct
gaaaattcatcaacatatgtttgtggattacctgtggctgtgagcttatacatatctctc
tgcaacatctctagtcaggacagattgtggctccgcatgattgttggtgagtctatccag
cacaccttcttagagttgtccagttttggaggtaatgatgaggtgaagagctgctctacg
attattcctttctatgctaccccaatggcatgctcgttcgttctgaggacatgtctggta
atggaatgcccatacggaagcgtcagcattcgtcaagaatgcaacagagggccaagtggt
tctataatcgaactctctgatgaattggatgtctattttgtctgtactaaacgaaggtga
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