KEGG   Oryza sativa japonica (Japanese rice): 4332833
Entry
4332833           CDS       T01015                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SRFP1-like
  KO
K10144  RING finger and CHY zinc finger domain-containing protein 1 [EC:2.3.2.27]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    4332833
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:osa04121]
    4332833
Enzymes [BR:osa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     4332833
Ubiquitin system [BR:osa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    4332833
SSDB
Motif
Pfam: zf-CHY zinc_ribbon_6 zf-RING_2 zf-C3HC4_2 zf-RING_5 zf-C3HC4 zf-C3HC4_4
Other DBs
NCBI-GeneID: 4332833
NCBI-ProteinID: XP_015628865
UniProt: Q10LI1
LinkDB
Position
3:complement(join(13151780..13151905,13152009..13152047,13152350..13152419,13152551..13152642,13152763..13152845,13152971..13153011,13153116..13153159,13153249..13153326,13153409..13153441,13153530..13153568,13153678..13153765,13153890..13153939))
AA seq 260 aa
MELDDASRHGFGRMGFGCKHYRRRCRIRAPCCNDVFHCRHCHNESTKDGHELDRHAVESV
ICLVCDTEQPVAQVCYNCGVCMGEYFCSACKFFDDDVDREHFHCQDCGICRVGGKDNFFH
CEKCGSCYSVSLRDKHCCIENSMKNNCPICYEYLFDSLRETSVLRCGHTMHLQCFHEMLK
HDKFSCPICSMPIFDMDKFLRALDAEIEANMLHIDYMGKGWIVCNDCRDTTQVYARVAGH
KCCHCQSHNTCRVAAPVLPA
NT seq 783 nt   +upstreamnt  +downstreamnt
atggagctcgacgacgcgtctcgccacggattcggcaggatgggatttggatgcaagcac
tacaggaggaggtgcaggatccgggcgccgtgctgcaacgacgtcttccactgccgccat
tgccacaacgagtccacgaaagacggccacgagctcgatcggcacgcggttgaatcggtt
atctgtctcgtctgtgacaccgaacagccggttgcgcaagtgtgctacaactgcggcgtt
tgcatgggcgagtacttctgcagcgcgtgcaaattcttcgacgacgacgttgacagggaa
cacttccactgccaagattgcggcatctgcagagttggagggaaggataacttcttccac
tgcgaaaaatgtggatcatgctactcggtcagcctgcgcgacaagcactgctgcatcgag
aactccatgaagaacaactgccccatctgttacgagtatctgtttgactctctaagggag
acgtccgtgctcagatgtgggcacacgatgcacctgcaatgcttccacgagatgctgaag
cacgacaagttctcttgtcccatatgctcgatgcctatctttgacatggacaagttcttg
agggctttggacgctgagattgaagcaaatatgctgcacatagattacatgggaaaggga
tggatcgtgtgcaacgactgcagggacacgacgcaggtgtacgcgagggtggcagggcac
aagtgctgccattgccagtctcacaacacctgcagggtggctgccccggtgctccctgct
taa

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