Oryza sativa japonica (Japanese rice): 4335673
Help
Entry
4335673 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00020
Citrate cycle (TCA cycle)
osa00785
Lipoic acid metabolism
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
osa01200
Carbon metabolism
osa01210
2-Oxocarboxylic acid metabolism
Module
osa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
osa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
4335673
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
4335673
Enzymes [BR:
osa01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
4335673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-GeneID:
4335673
NCBI-ProteinID:
XP_015635806
UniProt:
A0A0P0W9W2
LinkDB
All DBs
Position
4:join(19531802..19533337,19533733..19533959,19534047..19534379,19535351..19535597,19536225..19536353,19536436..19536651,19536725..19536848,19537326..19537564)
Genome browser
AA seq
1016 aa
AA seq
DB search
MGWFRAASGLARVALRRNLARAPANPFAGPAPRYFHSTRPRRFAAPVPRAVPLSRLTDSF
LDGTSSVYLEELQRAWEADPTSVDESWDNFFRNFVGQAATSPGISGQTIQESMRLLLLVR
AYQVSGHLKAKLDPLALEERPIPDVLDPAFYGFSEADLDREFFLGVWRMAGFLSENRPVQ
TLRSVLERLEQAYCGTIGYEYMHIPDREKCNWLRDRIETVNAREYSYDRRQVMLDRLMWS
TQFESFLAQKWTTAKRFGLEGAETLIPGMKEMFDRAADLGVESIVIGMPHRGRLNVLGNV
VRKPLRQIFSEFSGGTKPAEEGEGLYTGTGDVKYHLGTSYDRPTRGGKHIHLSLVANPSH
LEAVDPVVAGKTRAKQYYSNDLDRTKNLGVLLHGDGSFSGQGVVYETLHLSALPNYTTGG
TIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALDAPIFHVNGDDLEAVVHVCELAAEWRQT
FHSDVVVDIVCYRRFGHNEIDEPSFTQPKMYKIIRNHQSALEIYQNRLLESGKISKEDID
KMQKKVSTILNDEFQNSKEYIPNKRDWLSAYWTGFKSPEQISRIRNTGVKPEILKRVGEA
MTTLPENFKPHRAVKKIFELRRQMIETGEGIDWAVGEALAFATLIIEGNHVRLSGQDVER
GTFSHRHAVIHDQETGEQYCPLDNLVMNQDEELFTVSNSSLSEFAVLGFELGYSMENPNS
LVLWEAQFGDFSNGAQVIFDQFLSSGEAKWLRQTGLVVCLPHGYDGQGPEHSSARLERFL
QMSDDNPYVIPEMDPTLRKQIQQCNWQVVNVTTPANYFHVLRRQIHRDFRKPLIVMSPKN
LLRHKDCKSNLSEFDDLAGHPGFDKQGTRFKRLIKDQNNHKDLEEGIKRLVLCSGKVYYE
LDEERRKKERDDVAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEEPMNMGAYSYINPR
LLTAMRALGRGTIDDIKYVGRAPSAATATGFYSVHVQEQTELVQKALQRDPINSPF
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggggtggtttcgggctgcgtccggattggctcgggtggcgctgaggaggaacctggcg
cgtgctccggcgaacccttttgccggtcctgcgccacggtacttccactccacccgcccc
cggcggttcgccgctcctgtgccccgcgccgtgccgctctcgcgcctcaccgacagcttc
cttgatggcaccagcagcgtgtaccttgaggagctccagagggcgtgggaggctgatccc
acctctgtcgacgagtcctgggacaatttctttcggaactttgtcgggcaggctgcaact
tcgcctggcatatctgggcagacaattcaggaaagcatgaggttgctgcttcttgtgcga
gcgtaccaggtgagtggtcacctgaaggctaagcttgatcctctcgcgctagaggagcgg
cctatccctgatgttctggaccctgcgttctatgggttctctgaggctgatctggaccgg
gagttttttcttggtgtgtggaggatggctgggttcttgtcggagaatcgccctgtgcag
acactccgttctgtgttggagcggcttgagcaagcttactgtggtaccattgggtatgag
tacatgcacatacctgacagggagaaatgtaattggctgagggataggattgagacggtc
aatgcaagggagtactcctacgaccgtcgccaggtcatgcttgataggctcatgtggagc
actcagtttgagagcttcttggcacagaaatggacgaccgccaagcggtttggtcttgaa
ggtgcggagacactgatccctggcatgaaggagatgtttgacagggcagctgatcttggt
gtagagagcattgtgattggtatgccacacagaggtaggctgaatgtcttgggaaatgtc
gtgaggaagcccttgcgacagatcttcagtgagtttagtggtggtaccaagcctgccgaa
gaaggggagggcttgtatacagggactggagatgtcaaataccatctaggaacttcatac
gataggcctaccagaggtggaaagcatatccatctgtctctggttgcaaacccaagtcat
ttggaagcagtcgatcctgttgttgctgggaagaccagagcaaaacagtactattctaat
gatcttgacaggaccaagaatttaggagtcttgttgcatggtgatggaagcttctcaggg
cagggtgtagtgtatgaaaccctgcatctcagtgctcttccaaactacactactggtggg
acaattcacattgtggtcaataatcaggttgctttcactactgatccaagggcagggagg
tcttcgcagtattgcacagatgttgctaaagcattggatgctccaattttccatgtgaat
ggtgatgacttggaggcagtggttcatgtctgtgagcttgctgcggagtggcggcaaaca
tttcattctgatgttgtggtggatattgtatgctaccgccggtttgggcataacgagatt
gatgagccttccttcacccagcctaaaatgtacaagataattaggaaccaccagagtgct
cttgagatataccaaaacagacttttagaatctgggaagatatccaaggaagatattgat
aagatgcagaagaaggtcagcactatcttgaatgatgaattccaaaacagcaaagaatat
attcccaataagagagactggctctcagcttactggactggattcaagtcaccagaacag
atttcacgaatccgaaatactggtgtcaagccagagattctaaaacgtgttggagaagcc
atgactactctgcctgaaaatttcaagccccacagggctgtcaaaaagatttttgagctg
cgtcgtcagatgattgagacgggcgaaggcattgattgggctgttggtgaagcacttgct
tttgcaactcttataattgagggaaaccatgttaggttaagtggtcaggatgttgagagg
ggtacattcagccaccgccatgctgttatccatgaccaggaaactggagagcaatactgt
ccgcttgataatcttgttatgaatcaagatgaggaactatttactgtaagcaacagttcc
ctgtcagagtttgctgttttgggctttgaattgggctattccatggagaatccaaactca
ctggttttatgggaagcccagtttggtgatttttccaatggagctcaagtgatatttgat
cagtttctgagtagtggagaggcaaaatggctccgccagaccggtcttgtcgtttgcctt
cctcacggatatgatggtcaggggcctgaacattccagtgcaaggttggagcgtttcctt
cagatgagtgatgacaacccttatgttattcctgagatggatccaactctgaggaagcaa
atccagcagtgcaactggcaagttgtgaatgtcacaactcctgcaaactatttccatgtc
ctgcgtcgccagattcaccgggacttcagaaagcctttgattgttatgtctccaaagaat
ctccttcgacacaaggactgcaaatcgaatctttctgaatttgatgaccttgctggtcac
cctggatttgacaagcaaggaacccggtttaagcgtctaattaaagatcagaacaaccat
aaggaccttgaggagggaatcaagcgtttagttctctgttctggaaaggtatattatgag
ttggacgaagaaagaagaaaaaaggagcgtgatgatgttgctatatgtagagttgaacag
ctctgtccattcccatatgacctcatccagcgcgagttgaagcgatatccaaatgccgag
attgtttggtgccaagaggaacccatgaacatgggggcgtacagctacatcaatcctcgc
ctcctgaccgcgatgagggcgcttggtcggggcacgatagacgacatcaaatacgttgga
agggccccatctgcagccaccgcaacaggtttctactccgtccatgtgcaggagcaaacc
gagcttgtgcagaaggcactgcagcgagaccctatcaactctccattttga
Oryza sativa japonica (Japanese rice): 4344403
Help
Entry
4344403 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00020
Citrate cycle (TCA cycle)
osa00785
Lipoic acid metabolism
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
osa01200
Carbon metabolism
osa01210
2-Oxocarboxylic acid metabolism
Module
osa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
osa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
4344403
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
4344403
Enzymes [BR:
osa01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
4344403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Mrx7
Motif
Other DBs
NCBI-GeneID:
4344403
NCBI-ProteinID:
XP_015646480
UniProt:
Q0D3B2
Q6Z3X5
LinkDB
All DBs
Position
7:join(29891685..29893199,29893414..29893640,29893730..29894062,29894220..29894466,29894939..29895067,29895152..29895367,29895445..29895568,29896368..29896603)
Genome browser
AA seq
1008 aa
AA seq
DB search
MAWLRAASGLARHALRRRVPVASRFFHSARPAWRSSAPVPRAVPLSRLTDSFLDGTSSVY
LEELQRAWEADPSSVDESWDNFFRNFLGQAAPSSAGLSGQTIQESMQLLLLVRAYQVNGH
MKAKLDPLRLDDRAVPDDLDLSLYGFTEADLDREFFLGVWRMAGFLSDNRPVLTLREILS
KLEQAYCGPIGYEYMHIPDRDKCNWLRDKIETAKLKEYNKDRRLVMLDRLIWSTQFENFL
ATKWATAKRFGLEGGETLIPGMKEMFDRAADLGVENIVIGMPHRGRLNVLGNVVRKPLSQ
IFSEFTGGTRPVEGEDGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLVANPSHLEAVDPV
VIGKTRAKQFYSNDLDRTKNMGILIHGDGSFAGQGVVYETLHLSALPSYTTGGTIHIVVN
NQVAFTTDPRAGRSSQYCTDVAKALNAPIFHVNGDDLEAVVRVCELAAEWRQTFHSDVVV
DLICYRRFGHNEIDEPSFTQPKMYQVIKNHPSSLKLYEQKLLGTGEVSKEDVQKIHEKVN
RILNEEFAKSKDYVPNKRDWLSAYWTGFKSPEQISRVRNTGVNPGVLKRVGQAITTLPED
FKPHRAVKKIFEQRAAMIESGEGIDWAVAEALAFATLIVEGNHVRLSGQDVERGTFSHRH
AVLHDQENGRKHCPLDHVVMNQNEELFTVSNSSLSEFAVLGFEMGYSMENPNSLVLWEAQ
FGDFSNGAQVMFDQFLSSGEAKWLRQTGLVVLLPHGYDGQGPEHSSARLERFLQMSDDNP
FVIPEMEPTLRKQIQECNWQVVNVTTPANYFHVLRRQIHREFRKPLIVMAPKNLLRHKDC
KSNLSEFDDVEGHPGFDKQGTRFKRLIKDRNDHKQVEEGIKRLVLCSGKVYYELDEERKK
TERSDVAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEEPMNMGAYSYISPRLYASMKT
LGRGSFDDIKYVGRAPSAATATGFLSVHAQEQTELVKKALQAEPIKFP
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggctccgcgccgcctcgggcctcgcccgccacgccctccgccgccgcgtgccc
gtcgcttcccgtttcttccactcggcgcggccggcctggaggtcctccgccccggtgccc
cgcgccgtcccgctgtccaggcttaccgacagcttcctcgacggcaccagcagcgtctac
ctcgaggagctccagcgcgcatgggaggccgacccctcctccgtcgacgaatcctgggac
aacttcttccgcaacttcctcggccaggccgcgccctcctccgccggcctctccggccag
accatccaggagagcatgcagctcctcctcctcgtccgtgcctaccaggttaacggccac
atgaaggccaagctcgacccgctccgactcgacgaccgcgccgtcccggacgacctcgac
ctttccctctacggcttcaccgaagctgacctcgaccgcgagttcttcctcggcgtttgg
aggatggccggtttcctctccgacaaccgccccgtcctcaccctccgcgagatcctcagc
aagctcgagcaggcctactgcggccccatcggctacgagtacatgcacatccctgacagg
gacaagtgcaactggctaagggacaagatcgagaccgccaagctcaaggagtacaacaag
gaccgccgcctcgtcatgctggacaggctcatctggagcacccagtttgagaacttcctc
gccaccaagtgggccactgccaagcgctttggcctcgagggcggcgagaccctcatccct
ggcatgaaagagatgtttgacagggctgccgaccttggcgtcgagaacattgtaatcggc
atgccacacaggggaaggcttaatgtgcttggcaatgttgtccgcaagcccttgtcgcag
attttcagtgagttcaccggtgggactaggcccgtcgaaggcgaggatggcctctacact
ggaaccggtgatgtcaagtaccatctgggcacctcctatgacaggccaactcgaggtgga
aagaggatccacctatcgttggttgcgaatcccagtcacctcgaggctgtcgatcctgtt
gtcataggcaagacgcgggcaaagcaattttactccaatgatcttgacaggacaaagaac
atgggcattctcatccatggagatggcagctttgctgggcagggtgttgtctatgagaca
cttcatctgagtgcccttccaagctatacaactggaggaaccatccacatcgttgtcaat
aaccaagttgccttcacaacagatccaagagccggcagatcttcgcagtattgtacggat
gttgccaaagccttgaacgctcctatattccatgtaaacggtgatgatctggaggcagtt
gtacgagtttgtgagcttgcagctgagtggcgccagactttccattctgatgtggtagtc
gatctgatctgttaccgacgatttggacataatgaaatcgatgagccctccttcacacag
ccaaagatgtatcaggttattaagaaccatcctagttcattaaagctttatgaacagaaa
ctgctaggaacaggcgaagtctcaaaagaagacgttcagaagatccacgagaaagtcaac
agaatcctgaatgaagagtttgcaaaaagcaaagattatgttcccaataagagggactgg
ctttcggcttactggactggcttcaagtctcctgagcagatttcacgcgtccgcaacact
ggggttaatccaggggtgctgaaacgtgttggacaggcaattactactttacctgaagac
ttcaagccccacagggcagtgaagaagatttttgagcagcgtgcagcaatgatcgagagc
ggtgaaggaattgattgggccgttgctgaagcccttgcctttgcaacactcattgtggaa
ggcaaccatgttaggctgagtggacaggacgtggaaagaggaacttttagccaccgtcat
gcagttctgcatgaccaggaaaacgggaggaaacattgcccacttgaccatgttgtgatg
aatcaaaacgaggagctgtttaccgttagcaacagttcactttcagaatttgctgttctt
ggttttgaaatggggtactccatggagaaccctaattcactagtgctctgggaagctcag
tttggtgacttttccaatggtgcacaagtgatgtttgaccagtttttgagtagtggagag
gcaaaatggctgcgtcaaactggccttgtcgttctactgcctcatggttatgatggccaa
ggcccagagcattccagtgcccgtttggagcgctttcttcagatgagtgatgataatcct
tttgtcatacctgagatggaaccaacactccgcaagcagatccaggagtgtaattggcaa
gttgtgaacgtgacaacgcctgcaaactatttccatgtgctgcgtcgtcagatacatagg
gagttccggaagcccctgattgtaatggcccccaagaacctacttcggcacaaggattgc
aagtcaaatctctctgagtttgatgatgttgaaggccatccaggtttcgataagcaagga
acacgcttcaagcggttgataaaggaccggaatgaccacaagcaagtcgaggagggtatc
aaacgccttgtattgtgttctgggaaggtgtactatgagcttgatgaagaacggaagaag
actgaacgcagtgatgttgcaatttgcagagttgaacaactttgtccattcccatatgat
cttatccagagagagctaaaaagatatccaaatgcggagattgtctggtgccaagaggaa
cccatgaatatgggcgcatatagttacatctcccctcgcctgtacgcctctatgaagact
cttgggcgtggttcattcgatgacatcaagtatgtgggcagggcgccttcagctgcgaca
gctactggcttcctgtcggttcatgcgcaggagcagacagagctggtaaagaaagcactg
caggcagagcctatcaagttcccctga
DBGET
integrated database retrieval system
