Oryza sativa japonica (Japanese rice): 4337015
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Entry
4337015 CDS
T01015
Name
(RefSeq) transcription factor PIF1
KO
K16189
phytochrome-interacting factor
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
4337015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4337015
Transcription factors [BR:
osa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
4337015
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
4337015
NCBI-ProteinID:
XP_015634978
UniProt:
B9FCJ7
A0A0P0WF46
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All DBs
Position
4:join(31926210..31926278,31926362..31926427,31926518..31926583,31926734..31926988,31927363..31927452)
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AA seq
181 aa
AA seq
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MEARRPTPTRRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLK
SLQLQLQMLVMGKGMAPVVPPELQQYMHYITADPSQIPPIRPSEPRPFQITHATQQRQSN
VESDFLSQMQNLHPSEPPQNFLRPPKLQLYTPEQQRRGLASSSGHNSGWITERNSSYNFL
E
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaagaaggcctacccctaccaggagaagcagatctgctgagttccacaatttt
tcagaaaggaggagaagggataggatcaatgagaagctgaaggcgctgcaagagctactt
ccaaattgcaccaagaccgacaaagtttcgatgctggatgaagcgatcgactacctgaaa
tcactccaactacaactccagatgctggtcatggggaagggaatggcaccggttgttcct
cctgagctgcaacaatacatgcactatatcacagctgatccttctcaaattcctcccata
cgcccctccgagccgcggccatttcagataacccacgccacccaacagagacagtctaac
gtcgagtcggatttcttgagccagatgcagaatttgcacccttcagagccacctcaaaat
ttcctcagaccaccaaaattgcagttgtacacgccggagcagcagagaagaggtctagct
agtagcagtggccacaacagcggttggatcacggagaggaattcatcgtacaacttcttg
gagtga
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integrated database retrieval system
