Oryza sativa japonica (Japanese rice): 4345969
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Entry
4345969 CDS
T01015
Symbol
OsXylT, RCN11, xt
Name
(RefSeq) beta-1,2-xylosyltransferase RCN11
KO
K03714
glycoprotein 2-beta-D-xylosyltransferase [EC:
2.4.2.38
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00513
Various types of N-glycan biosynthesis
osa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
4345969 (OsXylT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
osa01003
]
4345969 (OsXylT)
Enzymes [BR:
osa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.38 glycoprotein 2-beta-D-xylosyltransferase
4345969 (OsXylT)
Glycosyltransferases [BR:
osa01003
]
Glycan extension
N-Glycan
4345969 (OsXylT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_61
DUF5134
Motif
Other DBs
NCBI-GeneID:
4345969
NCBI-ProteinID:
NP_001409548
LinkDB
All DBs
Position
8:join(25033449..25034180,25035378..25035527,25036330..25037049)
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AA seq
533 aa
AA seq
DB search
MMPVRTYHHHHHHNNSNNHRLRRIIPRVLLAVFAIYAVSFAAYLLRHQSPHPHPHPAADP
ERDAVDAAGGGGGGGAVDRVRVEAPSSQKPWPRLPSFLPWTSASVRPPPKHSCEGYFGNG
FSRLVDVLPARGGGGGGWFRCHHSETLRSSICEGGRVRLDPGLIAMSRGGEPLDQVMGRA
EEEELPKYEPGALQVEAAAKRTGPLVEAGFLDAYVPTGGIGMHTMRSLLDSGRVVPPGEL
HCSQWVEEPTLLVTRFEYANLFHTITDWYSAYVSSRVTDLPNRPNVVFVDGHCKAQLEQT
WEALFSNVTYVKNFSGPVCFRHAILSPLGYETALFKGLSESFSCEGASAESLREKPDHQK
TARLSEFGEMILASFDLLRDDILSSKTSNGLNVLFVRREDYLAHPRHSGKVESRLSNEKE
VYDAIEGWAKGQKCKINVINGLFAHMNMKEQLRAIQEASVVIGAHGAGLTHLVSATPDTK
VLEIISSMYRRPHFALISHWKSLEYHAINLPGSYARVTDVINELSNILKGFGC
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctgtacgcacgtaccaccaccaccaccaccacaacaacagcaacaaccatcgg
ctacgccgcatcatcccccgagtcctcctcgccgtcttcgccatctacgccgtctcgttc
gcggcgtacctcctccgccaccagtcgccgcacccgcacccgcaccctgccgctgacccc
gagcgcgacgccgtggacgcagccggaggaggcggaggaggaggagccgtggaccgtgtg
cgggtagaagcgccgtcctcgcagaagccatggcctcgcctcccctccttcctcccgtgg
acgtccgcctccgttcggccgccgccgaagcactcctgtgaggggtacttcgggaacggg
ttctcccgcctcgtggacgtgctccccgcgcggggcggcggcggcggcgggtggttccgg
tgccaccacagcgagacgctgcgcagctcgatctgcgagggcgggagggtgcggctcgac
ccggggctcatcgcgatgtcgcgcggcggcgagccgctcgaccaggtgatgggccgcgcc
gaggaggaggagctgcccaagtacgagcccggcgcgctgcaggtggaggcggcggcgaag
aggacggggccgttggtggaagcggggttcctcgacgcctacgtgcccaccggcgggatc
gggatgcacacgatgaggtcgctgctcgactcggggcgcgtcgtgccgcccggcgagcta
cactgctcgcagtgggttgaagaaccaacacttctagtaactcgttttgaatatgcaaac
cttttccacacaattacggactggtacagtgcatatgtcagttccagagtcacggattta
cctaaccgccctaatgtggtctttgtggatggacattgcaaggcacaactggagcaaaca
tgggaagcacttttctcaaatgtgacatatgttaagaatttctctggccctgtttgtttt
cgacatgcaattctttcaccattgggctatgagactgcgctatttaagggccttagtgag
agctttagctgcgaaggtgcttctgcggagtccctcagagaaaagcctgatcaccagaaa
acggcaaggttgtctgaatttggtgagatgattttagcttcttttgatcttctgagggat
gacatactgtcatccaaaacatcaaatgggctcaatgttctctttgttcggcgagaggac
tacttggcccatccacgccacagtggaaaggttgaatctagactaagcaatgagaaggag
gtatatgatgcaattgagggctgggcaaaaggtcagaaatgcaaaataaatgtcatcaat
ggtctttttgcccacatgaacatgaaggagcaactgcgtgctatacaggaagcttcagta
gtaataggggcacatggggctggtctaactcacttggtttcagctaccccagatacaaaa
gtccttgaaatcatcagcagcatgtatcgacgcccacattttgcattgatctcacactgg
aagagcttagagtatcatgccataaatctccctggatcatatgcaagggtaacagatgtt
atcaatgagttgagtaatatactgaaaggttttggatgctga
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