Oryza sativa japonica (Japanese rice): 4348891
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Entry
4348891 CDS
T01015
Name
(RefSeq) vacuolar protein sorting-associated protein 2 homolog 3
KO
K12192
charged multivesicular body protein 2B
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4348891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4348891
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4348891
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
4348891
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
4348891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
YlqD
CCAP
Cep57_MT_bd
MerR-DNA-bind
Flagellin_C
Motif
Other DBs
NCBI-GeneID:
4348891
NCBI-ProteinID:
XP_015614222
UniProt:
Q9AUZ6
A3C5Q1
LinkDB
All DBs
Position
10:complement(join(18414104..18414155,18414640..18414695,18414786..18414821,18414955..18415035,18415154..18415225,18415488..18415559,18415649..18415753,18415848..18415898,18416169..18416203,18416786..18416830,18417034..18417067))
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AA seq
212 aa
AA seq
DB search
MNPFAKKPTPREAIRSSKRELTNATRGIERDIGTLQLEEKRLVAEIKRTAKTGNEAATRI
LARQLIRLRQQISNLQGSRAQIRGIATHTQAMHANTSVAAGMQSASKAMGALNKQMDPAK
QMKVMQEFQKQSAQMDMTNEMMSDSIDNILDDDQAEEETEDLANQVLDEIGVDIASQLSS
APKGRITGKKVQADESSELDELEKRLAALKNP
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccttcgcgaagaagcccacgccgcgagaggcgatccggagcagcaaacgtgag
ctgacgaatgctaccagaggtattgagagagatattggaacgttgcagctagaggaaaag
aggctagttgctgaaatcaaaaggactgcaaaaactggcaatgaggcagcaaccagaatt
ctggcccgccagctgatcaggctaagacagcaaatttctaatttacaaggtagcagagct
cagattaggggcattgcaacacatacacaggcaatgcatgccaacacttcagtggctgct
ggcatgcaaagtgcaagcaaagcaatgggagctttgaacaagcaaatggatccagccaaa
cagatgaaggtgatgcaagaattccaaaaacagtcagcacaaatggatatgacgaatgag
atgatgtctgactccattgacaatatcttagacgatgatcaagctgaggaagaaactgaa
gaccttgcaaatcaggtcctggatgagattggtgttgatattgcctcacagttatcctca
gctcctaaaggaaggattactggaaagaaggttcaagctgatgaaagttcagaattggac
gaactcgagaagaggctggctgctctgaaaaatccatag
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