Oryza sativa japonica (Japanese rice): 4350228
Help
Entry
4350228 CDS
T01015
Name
(RefSeq) anthocyanin regulatory Lc protein
KO
K28363
basic helix-loop-helix transcription factor family protein
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4350228
Transcription factors [BR:
osa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
4350228
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH-MYC_N
bHLH-TF_ACT-like_plant
HLH
bHLH_SAC51
bHLH_IRO3
bHLH_INO4
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
4350228
NCBI-ProteinID:
XP_015616671
LinkDB
All DBs
Position
11:complement(join(9017189..9017257,9017386..9017784,9018080..9018778,9019281..9019340,9019513..9019527,9019765..9019861,9024613..9024867,9027536..9027651))
Genome browser
AA seq
569 aa
AA seq
DB search
MEETPLPSGKNFRSQLAAAARSISWTYAIFWSISTSCPGVMTWKDGFYNGEIKTRKITSS
MNLTADELVLQRSEQLRELYDSLISGECGHRARRPVAALSPEDLGDTELYYLVCMTYAFC
PGQGLPGKSFASNEYVWLSNAQSADRKLFHRALIAKSASIKTIVCVPFIMHGVLELGTTD
PVSEDPALVDRITASLWDTPPRAAFSSEAGVADIVVFEDLDHGNTAVEATTTMVPGEPEP
HAVAGGEVAECESNAHNDLEQITMDDIGELYSLCEELDVLDDDSSSWVADPWSSFQLVPT
AEATDVDDAVVAALGAIDGSCRPSPSSFVAWKRTPDSDEVQAVPLISGEPPQKLLKKAVA
GAGAWMNNADGSAATMTTDQGSSIKNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASI
LAETIAYLKELEKRVEELESSSQPSPRPMETTRRRCCKSTGKKVSAGARAKRKAPAPEDT
DGERRHCVSNVNVTIMDNKELLLELQCQWKELLMTRVFDAIKGVSLDVLSVQASTSDGLL
GLKIQAKFASPAAVEPGMITEALRKAIAS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaccccgctgccatccgggaagaacttcaggagccagcttgctgctgcagcg
aggagcatcagttggacttatgccatattttggtccatttcaaccagctgtccaggagtt
atgacttggaaggacggcttctacaacggggagataaagacgaggaagatcacgagctcc
atgaacctcacggccgacgagctcgtcctgcagagaagcgagcagctaagggagctctac
gactctctcatctccggcgagtgtggccaccgagcgaggaggcccgtcgctgcgctgtcg
ccggaagatctcggggacacggaactgtactacctcgtttgcatgacctacgccttctgt
cccggccaagggttgccaggcaaaagcttcgcaagcaatgaatatgtttggctgtcaaac
gctcagtctgcagatagaaaactattccatcgcgcgctcatagcaaagagtgcatctatt
aagacaatcgtctgcgtgccatttatcatgcatggtgtccttgagctcgggaccactgat
ccggtttcggaggacccggctctcgtcgaccgtatcacggcgtcgttatgggatacgccg
ccccgcgcggcgttctcgtcggaggcgggagtcgccgacatcgtcgtcttcgaagacctc
gaccatggcaacaccgccgtcgaagcgacgacgacgatggtcccgggggagccggagcct
cacgctgtagccggcggcgaggtcgccgagtgcgagtccaacgcccacaacgacctcgag
cagatcaccatggacgacatcggcgagctctacagcctctgcgaggagctggacgtcctc
gacgacgacagtagcagctgggttgcggatccctggtcgtcttttcagctagtcccgacg
gcggaagctactgacgtcgacgatgccgtcgtcgccgctctaggcgccattgatggatct
tgcaggccgtcgccgtcgagttttgtggcgtggaagaggacgccggactcggacgaggtg
caggccgtgccgctcatcagcggagagccgccacagaagttgctgaagaaagctgtcgcc
ggcgccggtgcctggatgaacaatgctgacggcagcgcggcgacgatgacgactgatcaa
ggaagcagcatcaagaaccatgtcatgtcagagagaaggcgccgggagaagctcaaagag
atgttcttgattcttaaatcagtcgtcccatccattcacaaggtggacaaagcatcaatt
ctagcagaaacgatagcatacctcaaagagctggagaaaagggtggaagagctggaatcc
agcagccaaccatcgccgcgtccaatggaaacaacaagaagaagatgctgcaagagcacc
ggcaagaaggtttctgcaggagccagagccaagagaaaggcgccggcgccggaggacacc
gacggggagcggcgccattgtgtgagcaacgtgaacgtcaccatcatggacaacaaggag
cttctcctcgagctgcaatgccagtggaaggaattgctgatgacgagagtgttcgacgcg
atcaagggagtctccctggatgtcctctcggtgcaggcatcaacatcggatggtctcctt
ggactgaagatacaagctaagtttgcctcacctgctgccgtcgaacctgggatgattaca
gaagctctccggaaagctatagcaagctag
DBGET
integrated database retrieval system
