Oscillibacter valericigenes: OBV_01110
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Entry
OBV_01110 CDS
T01636
Symbol
abfD
Name
(GenBank) gamma-aminobutyrate metabolism dehydratase/isomerase
KO
K14534
4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase [EC:
4.2.1.120
5.3.3.3
]
Organism
ova
Oscillibacter valericigenes
Pathway
ova00650
Butanoate metabolism
ova00720
Other carbon fixation pathways
ova01100
Metabolic pathways
ova01120
Microbial metabolism in diverse environments
ova01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ova00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
OBV_01110 (abfD)
09102 Energy metabolism
00720 Other carbon fixation pathways
OBV_01110 (abfD)
Enzymes [BR:
ova01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.120 4-hydroxybutanoyl-CoA dehydratase
OBV_01110 (abfD)
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.3 vinylacetyl-CoA Delta-isomerase
OBV_01110 (abfD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HpaB_N
HpaB
Motif
Other DBs
NCBI-ProteinID:
BAK97309
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All DBs
Position
103871..105358
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AA seq
495 aa
AA seq
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MSLKTAKEYIESLRGMKTRVYMFGEKIDNWVDHPMIRPSINCVAMTYGLAHDPRYADLMT
ATSSLTGRTINRFTHLHQSAEDLVKKVKMQRLLGQKTASCFQRCVGMDAFNAVFSTTFEI
DEAHGTRYHENFKKFLTMVQDEDLTVDGAMTDPKGDRSKAPHQQADPDMYLHVVERREDG
IVVCGAKCHQTGSVNSHWHIFMPTIAMGPEDRDWAVSFACPTDAEGIYLIYGRQSCDTRK
LEENADIDLGNKKFGGQEALVVLDHVFIPNEYLFLNGEYEFAGMMVERFAGYHRQSYGGC
KVGVGDVVIGAAALAAEYNGVEKASAVKDKLIEMTHLNETLYSCGIACSCEGCPTKAGNY
QIDLLLANVCKQNVTRFPYEIVRLAEDVAGGAMVTLPSEKDFKSDTVVGNSGETIGEICS
KYFKTKEEVSTEDRARVFRFLENICLGSAAVGYRTESLHGAGSPQAQRIMIARQGDFQGK
KELAKNIAGIQDEKK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtccttaaaaacagcgaaagagtacatagagagcctgcgggggatgaagacgcgggtg
tacatgttcggcgagaagatcgacaactgggtggaccaccccatgatccggcccagcatc
aactgcgtggccatgacctacggcctggcccacgacccgcggtacgcggatctgatgacg
gccacgtccagcctgacgggccgcaccatcaaccgcttcacccacctccaccagtccgcc
gaggatcttgtgaagaaggtgaaaatgcagcgcctgcttggccagaagaccgccagctgc
ttccagcgctgcgtgggcatggacgccttcaacgctgtgttttccacgacgtttgaaatc
gacgaggcccacggcacccgctaccacgagaacttcaagaagttcctcaccatggtccag
gacgaggacctgacggtggacggggccatgacggaccccaagggggaccggtccaaagcc
ccccaccagcaggcggacccggacatgtacctccacgtggtggagcgccgggaggacggg
atcgtggtctgcggtgccaagtgccaccagaccggctccgtcaactcccactggcacatc
ttcatgcccaccatcgccatgggcccggaggatagggactgggctgtgtccttcgcctgc
cccaccgacgcggagggcatctacctcatctacggccgccagtcctgcgacacccgcaag
ctggaggagaacgccgacatcgaccttggcaacaagaagttcggcggccaggaggcattg
gtggtgctggaccacgtgtttattcccaacgagtacctctttctcaacggcgaatatgag
ttcgccgggatgatggtggagcggttcgccggataccaccgccagagctacggcgggtgc
aaggtgggcgtgggcgacgtggtgatcggggcggcggcgctggccgccgagtacaacggc
gtggagaaggcctccgcggtgaaggacaagctcatcgagatgacccatctcaacgagacg
ctctactcctgcggcatcgcctgctcctgcgagggctgcccgacgaaggcgggcaactac
cagatcgatttgctgcttgccaacgtgtgcaagcagaacgtcacccgctttccctatgag
atcgtgcgccttgccgaggatgtggccggcggcgccatggttactttgccctccgaaaag
gatttcaagtccgacacagtggtgggcaacagcggcgagaccatcggcgagatctgcagc
aaatatttcaagaccaaggaggaggtttccaccgaggaccgggcgagggttttccggttt
ttggagaacatctgccttgggtccgccgccgtgggctaccgcacggagtccctgcacggc
gcgggttcgccccaggcccagcgcatcatgatcgcccggcagggagattttcagggcaag
aaggagctggcgaaaaacatcgccggcattcaagacgagaagaagtaa
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