Parabacteroides absconsus: NEE14_013535
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Entry
NEE14_013535 CDS
T10821
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
pabc Parabacteroides absconsus
Pathway
pabc01501
beta-Lactam resistance
pabc01503
Cationic antimicrobial peptide (CAMP) resistance
pabc02020
Two-component system
pabc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pabc00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NEE14_013535
09132 Signal transduction
02020 Two-component system
NEE14_013535
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NEE14_013535
01503 Cationic antimicrobial peptide (CAMP) resistance
NEE14_013535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pabc02000
]
NEE14_013535
02044 Secretion system [BR:
pabc02044
]
NEE14_013535
01504 Antimicrobial resistance genes [BR:
pabc01504
]
NEE14_013535
Transporters [BR:
pabc02000
]
Other transporters
Pores ion channels [TC:
1
]
NEE14_013535
Secretion system [BR:
pabc02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NEE14_013535
RTX toxin transporter
NEE14_013535
Multiple protein transporter
NEE14_013535
RaxAB-RaxC type I secretion system protein
NEE14_013535
Antimicrobial resistance genes [BR:
pabc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
NEE14_013535
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
NEE14_013535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF3231
Nuf2
DUF1366
Motif
Other DBs
NCBI-ProteinID:
WWV66002
LinkDB
All DBs
Position
complement(3217069..3218418)
Genome browser
AA seq
449 aa
AA seq
DB search
MKRLILLTGISACLLSAPAWSNEPVKTWSLEECIRYAIEHNIDLKQRQLDHDNKKVELHT
SKYSWLPDLNANIGQNFDFGRSPSKTGVIVDQNSANSSASISLSMPIFDGFKIPNDIAAK
RLNLQAAVENLNKAKEDLSINIASYYLQVLYNKEMERIAELQLALSQEQITKTEAMVKAG
KVPLSQLYDIKAQAANDEVSLTEARNNVKLALLDLAQSLELERSGTEFDIVTPATDNAVN
TYMSSIIPPDDIYQQAVTFKPQIKEQEYLLESMKKQLKVAQSYYYPKINFGASYSNGYYH
YYTGDVEMPAFADQLAQNGRKTIGFSLSIPLFNRFQVRNSVRQARISIHNQELMMENTKK
TLYKEIQQAYYNATAAQEKYLASDKSVLASKEAFKYAEDRYNAGKSTVFEFNEAKTKYAK
SLAEQAQSKYEFIFRAKILDFYNGTPLKL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgattgattctattaacaggaatttccgcctgcttgctttcggctccagcctgg
agtaacgaaccagtcaagacgtggtcgctcgaagaatgtatccgctatgcgatagaacat
aatatcgatctgaagcaacgtcagctcgatcatgacaataagaaggtggaattgcatacc
agtaagtacagctggctgcctgacttgaatgcgaatatcggacagaacttcgactttggc
cgctctccttcgaagacaggtgtaattgtagaccagaactcagccaacagttcggcttct
atttccttgtcgatgccaatcttcgacggtttcaagattccaaatgacatcgccgccaaa
cgattaaacctgcaggcagctgtcgaaaacctgaataaagccaaagaagatctctctatc
aacattgcttcgtattatttgcaggtcttgtacaacaaagagatggagcgaattgccgaa
ctccaactggctttgagtcaggagcaaatcaccaagacggaagccatggtaaaagcaggg
aaagttccgttgtcacaactctatgatatcaaggcacaggcagccaacgatgaagtatcg
ctgaccgaagcccgcaataatgtcaagctggctttgctggatttagcacagagtctggag
ctggaacggagcggaactgaatttgatatcgtcacaccggcaacggataatgcagtcaat
acttatatgagcagcattattccaccggatgatatttatcaacaggcagtaacattcaag
cctcaaatcaaggagcaagagtatctgttggaaagtatgaaaaagcaattgaaggtagct
cagtcgtattattatccgaagattaacttcggagccagctattccaatggttattatcat
tactataccggagatgttgaaatgcccgctttcgcagatcagttggcacagaacggacga
aagaccatcggtttctcgttaagtattccgcttttcaaccgtttccaggtgcggaacagt
gtacgacaagcgcgtattagtatccataatcaggagctgatgatggagaataccaagaaa
acgctctataaagagatacaacaggcttattacaatgcaacggcggcacaagagaagtat
ttggcttccgacaaatccgtgctggcaagtaaggaagctttcaagtatgcagaagaccgg
tataatgccggaaagagtacggtattcgaattcaacgaagcgaaaaccaagtatgcaaaa
agcttggctgaacaggcacaatccaaatatgaattcattttccgggccaagatcctggac
ttctacaacggtacaccgctgaagttataa
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