KEGG   PATHWAY: pag00920
Entry
pag00920                    Pathway                                
Name
Sulfur metabolism - Pseudomonas aeruginosa LESB58
Description
Sulfur is an essential element for life and the metabolism of organic sulfur compounds plays an important role in the global sulfur cycle. Sulfur occurs in various oxidation states ranging from +6 in sulfate to -2 in sulfide (H2S). Sulfate reduction can occur in both an energy consuming assimilatory pathway and an energy producing dissimilatory pathway. The assimilatory pathway, which is found in a wide range of organisms, produces reduced sulfur compounds for the biosynthesis of S-containing amino acids and does not lead to direct excretion of sulfide. In the dissimilatory pathway, which is restricted to obligatory anaerobic bacterial and archaeal lineages, sulfate (or sulfur) is the terminal electron acceptor of the respiratory chain producing large quantities of inorganic sulfide. Both pathways start from the activation of sulfate by reaction with ATP to form adenylyl sulfate (APS). In the assimilatory pathway [MD:M00176] APS is converted to 3'-phosphoadenylyl sulfate (PAPS) and then reduced to sulfite, and sulfite is further reduced to sulfide by the assimilatory sulfite reductase. In the dissimilatory pathway [MD:M00596] APS is directly reduced to sulfite, and sulfite is further reduced to sulfide by the dissimilatory sulfite reductase. The capacity for oxidation of sulfur is quite widespread among bacteria and archaea, comprising phototrophs and chemolithoautotrophs. The SOX (sulfur-oxidation) system [MD:M00595] is a well-known sulfur oxidation pathway and is found in both photosynthetic and non-photosynthetic sulfur-oxidizing bacteria. Green sulfur bacteria and purple sulfur bacteria carry out anoxygenic photosynthesis with reduced sulfur compounds such as sulfide and elemental sulfur, as well as thiosulfate (in some species with the SOX system), as the electron donor for photoautotrophic growth. In some chemolithoautotrophic sulfur oxidizers (such as Thiobacillus denitrificans), it has been suggested that dissimilatory sulfur reduction enzymes operate in the reverse direction, forming a sulfur oxidation pathway from sulfite to APS and then to sulfate.
Class
Metabolism; Energy metabolism
Pathway map
pag00920  Sulfur metabolism
pag00920

Module
pag_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pag00920]
pag_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pag00920]
Other DBs
GO: 0006790
Organism
Pseudomonas aeruginosa LESB58 [GN:pag]
Gene
PLES_39191  cysP; sulfate-binding protein of ABC transporter [KO:K02048]
PLES_02791  sbp; sulfate-binding protein precursor [KO:K23163]
PLES_02781  cysT; sulfate transport protein CysT [KO:K02046]
PLES_02771  cysW; sulfate transport protein CysW [KO:K02047]
PLES_02761  cysA; sulfate transport protein CysA [KO:K02045] [EC:7.3.2.3]
PLES_10381  probable periplasmic taurine-binding protein precursor [KO:K15551]
PLES_10401  probable permease of ABC taurine transporter [KO:K15552]
PLES_10391  probable ATP-binding component of ABC taurine transporter [KO:K10831] [EC:7.6.2.7]
PLES_10411  tauD; taurine dioxygenase [KO:K03119] [EC:1.14.11.17]
PLES_16111  putative sulfonate binding protein [KO:K15553]
PLES_25751  putative periplasmic aliphatic sulfonate-binding protein [KO:K15553]
PLES_25761  putative periplasmic aliphatic sulfonate-binding protein [KO:K15553]
PLES_16151  putative ABC-type transporter periplasmic sulfonate-binding protein [KO:K15553]
PLES_01871  probable binding protein component of ABC transporter [KO:K15553]
PLES_25741  putative periplasmic aliphatic sulfonate-binding protein [KO:K15553]
PLES_25711  putative periplasmic aliphatic sulfonate-binding protein [KO:K15553]
PLES_29951  putative ABC transporter, periplasmic binding protein [KO:K15553]
PLES_30081  hypothetical protein [KO:K15553]
PLES_16171  probable permease of ABC transporter [KO:K15554]
PLES_16121  probable permease of ABC transporter [KO:K15554]
PLES_01861  probable permease of ABC transporter [KO:K15554]
PLES_29971  probable permease of ABC transporter [KO:K15554]
PLES_30091  probable permease of ABC transporter [KO:K15554]
PLES_16181  probable ATP-binding component of ABC transporter [KO:K15555] [EC:7.6.2.14]
PLES_01851  probable ATP-binding component of ABC transporter [KO:K15555] [EC:7.6.2.14]
PLES_16131  probable ATP-binding component of ABC transporter [KO:K15555] [EC:7.6.2.14]
PLES_29961  probable ATP-binding component of ABC transporter [KO:K15555] [EC:7.6.2.14]
PLES_30101  probable ATP-binding component of ABC transporter [KO:K15555] [EC:7.6.2.14]
PLES_16161  ssuD; putative sulfonate monooxygenase [KO:K04091] [EC:1.14.14.5 1.14.14.34]
PLES_29471  msuD; methanesulfonate sulfonatase MsuD [KO:K04091] [EC:1.14.14.5 1.14.14.34]
PLES_25721  putative lavin-dependent oxidoreductase [KO:K04091] [EC:1.14.14.5 1.14.14.34]
PLES_25701  putative flavin-dependent oxidoreductase [KO:K04091] [EC:1.14.14.5 1.14.14.34]
PLES_16141  putative NADH-dependent FMN reductase [KO:K00299] [EC:1.5.1.38]
PLES_29461  msuE; NADH-dependent FMN reductase MsuE [KO:K00299] [EC:1.5.1.38]
PLES_48211  cysN; ATP sulfurylase GTP-binding subunit/APS kinase [KO:K00955] [EC:2.7.7.4 2.7.1.25]
PLES_48221  cysD; ATP sulfurylase small subunit [KO:K00957] [EC:2.7.7.4]
PLES_55681  cysQ; CysQ protein [KO:K01082] [EC:3.1.3.7]
PLES_35731  cysH; 3'-phosphoadenosine-5'-phosphosulfate reductase [KO:K00390] [EC:1.8.4.8 1.8.4.10]
PLES_48931  probable oxidoreductase [KO:K00380] [EC:1.8.1.2]
PLES_08411  probable sulfite or nitrite reductase [KO:K00381] [EC:1.8.1.2]
PLES_34891  cysI; sulfite reductase [KO:K00381] [EC:1.8.1.2]
PLES_29581  putative transmembrane protein [KO:K17218] [EC:1.8.5.4]
PLES_40201  probable 3-mercaptopyruvate sulfurtransferase [KO:K01011] [EC:2.8.1.1 2.8.1.2]
PLES_53421  rhdA; thiosulfate:cyanide sulfurtransferase [KO:K01011] [EC:2.8.1.1 2.8.1.2]
PLES_05861  putative thiosulfate/cyanide sulfurtransferase [KO:K02439] [EC:2.8.1.1]
PLES_11581  cysE; O-acetylserine synthase [KO:K00640] [EC:2.3.1.30]
PLES_23951  cysK; cysteine synthase A [KO:K01738] [EC:2.5.1.47]
PLES_42611  putative cysteine synthase [KO:K01738] [EC:2.5.1.47]
PLES_03871  metX; homoserine O-acetyltransferase [KO:K00641] [EC:2.3.1.31 2.3.1.46]
PLES_19531  metZ; o-succinylhomoserine sulfhydrylase [KO:K10764] [EC:2.5.1.-]
PLES_10211  possible Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase [KO:K17228] [EC:1.14.14.35]
PLES_07291  probable AMP-binding enzyme [KO:K20034] [EC:6.2.1.44]
PLES_30991  Putative Acyl-CoA synthetase [KO:K20034] [EC:6.2.1.44]
PLES_40281  probable acyl-CoA dehydrogenase [KO:K20035] [EC:1.3.99.41]
PLES_05041  probable acyl-CoA dehydrogenase [KO:K20035] [EC:1.3.99.41]
PLES_55811  probable acyl-CoA dehydrogenase [KO:K20035] [EC:1.3.99.41]
PLES_07281  probable acyl-CoA dehydrogenase [KO:K20035] [EC:1.3.99.41]
PLES_05051  probable acyl-CoA dehydrogenase [KO:K20035] [EC:1.3.99.41]
PLES_05031  probable acyl-CoA dehydrogenase [KO:K20035] [EC:1.3.99.41]
Compound
C00033  Acetate
C00042  Succinate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00065  L-Serine
C00084  Acetaldehyde
C00087  Sulfur
C00094  Sulfite
C00097  L-Cysteine
C00155  L-Homocysteine
C00224  Adenylyl sulfate
C00245  Taurine
C00263  L-Homoserine
C00283  Hydrogen sulfide
C00320  Thiosulfate
C00409  Methanethiol
C00580  Dimethyl sulfide
C00979  O-Acetyl-L-serine
C01118  O-Succinyl-L-homoserine
C01861  Trithionate
C02084  Tetrathionate
C03920  2-(Methylthio)ethanesulfonate
C04022  S,S-Dimethyl-beta-propiothetin
C08276  3-(Methylthio)propanoate
C11142  Dimethyl sulfone
C11143  Dimethyl sulfoxide
C11145  Methanesulfonic acid
C15521  Alkanesulfonate
C17267  S-Sulfanylglutathione
C19692  Polysulfide
C20870  3-(Methylthio)propanoyl-CoA
C20955  3-(Methylthio)acryloyl-CoA
C22834  Protein-trisulfide
Reference
  Authors
Grein F, Ramos AR, Venceslau SS, Pereira IA
  Title
Unifying concepts in anaerobic respiration: Insights from dissimilatory sulfur metabolism.
  Journal
Biochim Biophys Acta 1827:145-60 (2013)
DOI:10.1016/j.bbabio.2012.09.001
Reference
  Authors
Fauque GD, Barton LL
  Title
Hemoproteins in dissimilatory sulfate- and sulfur-reducing prokaryotes.
  Journal
Adv Microb Physiol 60:1-90 (2012)
DOI:10.1016/B978-0-12-398264-3.00001-2
Reference
  Authors
Sakurai H, Ogawa T, Shiga M, Inoue K
  Title
Inorganic sulfur oxidizing system in green sulfur bacteria.
  Journal
Photosynth Res 104:163-76 (2010)
DOI:10.1007/s11120-010-9531-2
Reference
  Authors
Falkenby LG, Szymanska M, Holkenbrink C, Habicht KS, Andersen JS, Miller M, Frigaard NU
  Title
Quantitative proteomics of Chlorobaculum tepidum: insights into the sulfur metabolism of a phototrophic green sulfur bacterium.
  Journal
FEMS Microbiol Lett 323:142-50 (2011)
DOI:10.1111/j.1574-6968.2011.02370.x
Reference
  Authors
Gregersen LH, Bryant DA, Frigaard NU
  Title
Mechanisms and evolution of oxidative sulfur metabolism in green sulfur bacteria.
  Journal
Front Microbiol 2:116 (2011)
DOI:10.3389/fmicb.2011.00116
Reference
  Authors
Beller HR, Chain PS, Letain TE, Chakicherla A, Larimer FW, Richardson PM, Coleman MA, Wood AP, Kelly DP.
  Title
The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans.
  Journal
J Bacteriol 188:1473-88 (2006)
DOI:10.1128/JB.188.4.1473-1488.2006
Reference
PMID:9695921
  Authors
Pott AS, Dahl C
  Title
Sirohaem sulfite reductase and other proteins encoded by genes at the dsr locus of Chromatium vinosum are involved in the oxidation of intracellular sulfur.
  Journal
Microbiology 144 ( Pt 7):1881-94 (1998)
DOI:10.1099/00221287-144-7-1881
Reference
  Authors
Frigaard NU, Dahl C
  Title
Sulfur metabolism in phototrophic sulfur bacteria.
  Journal
Adv Microb Physiol 54:103-200 (2009)
DOI:10.1016/S0065-2911(08)00002-7
Related
pathway
pag00260  Glycine, serine and threonine metabolism
pag00270  Cysteine and methionine metabolism
pag00680  Methane metabolism
pag00720  Other carbon fixation pathways
KO pathway
ko00920   
LinkDB

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