Pseudomonas agarici: AWM79_05530
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Entry
AWM79_05530 CDS
T11104
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pagb Pseudomonas agarici
Pathway
pagb01501
beta-Lactam resistance
pagb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AWM79_05530
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AWM79_05530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pagb02000
]
AWM79_05530
01504 Antimicrobial resistance genes [BR:
pagb01504
]
AWM79_05530
Transporters [BR:
pagb02000
]
Other transporters
Pores ion channels [TC:
1
]
AWM79_05530
Antimicrobial resistance genes [BR:
pagb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AWM79_05530
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
AWM79_05530
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
AWM79_05530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Secretin_N_2
Motif
Other DBs
NCBI-ProteinID:
AMB84799
UniProt:
A0A0X1SZ30
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All DBs
Position
1259061..1260554
Genome browser
AA seq
497 aa
AA seq
DB search
MTDRSHCNAPVPAALRLETARGSRLLTLALAGLLLSACAVGPDYRRPDAQTPEQYKEASG
WRQAQPSDSLARGAWWELYGDRTLNDLVAKLNSSNQTVAQSEAQFRQAQALVRSSRGAFF
PSVDLSAGKTRSSQGSGSSTSSLSSSSSGIRDTYNTQLGVSWEADIWGKLRRGLEADQAS
AQASFADLAAMRLSQQSELVQNYLQLRVIDEQKRLLEATVMAYERSLKTTENQYRFGVSG
RAAIAQAQTQLKSTQGDLIDLIWQRAQFENAIAVLTGQPPAQFTLVTTQDIPALPQIPLS
LPSQLLERRPDIASAERSVISANAKIGVAKSAYYPDLSLSLSGGYSSSTYANWISLPNRF
WSVGPKLAMTLFDGGQRSAEVDRTEAVYDQTVAKYRQTVLDGFREVENYLVQLKVMEDEA
AVRQQALDAARESLRLTDNQYKAGLIAYLDVVTVQTTALSNERSVLSLLQSRLIASVQLI
AALGGGWDGNTDPSAAR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccgttcacactgcaacgcgcccgtaccggcagccctacgccttgagacggcc
cgtggctcgcgcctgctgactctggccttggccgggctgttgctcagcgcttgtgctgtt
ggcccggactaccggcgcccggatgcccagaccccggagcaatacaaggaggcgtccggt
tggcgccaggctcaacccagcgattcgctggctcgtggcgcctggtgggagctgtatggc
gaccgcacgctcaacgacctggtggcgaaactcaacagcagcaaccagacggtggcccag
tccgaagcgcagtttcgccaggcccaggccctggtgcgcagctcgcgcggcgcattcttt
ccgagtgtcgacctgagtgccggcaagactcgctccagccaaggcagcggtagtagcacc
tcaagcctgagcagttcgtcgagcgggatacgtgatacctacaacactcagcttggggtc
agttgggaggccgatatttggggcaagttgcgccgtggcctggaagccgatcaggccagc
gcccaggcgagctttgccgatctggcggccatgcgcttaagccagcaatcggagctggtg
cagaattacctgcagttgcgagtgatcgatgagcagaagcgtctgctcgaagccacggtc
atggcttacgagcgctccttgaaaaccaccgagaaccaataccgttttggggtttccggc
agggcggccattgcccaggcgcaaacgcaactgaaaagtacccagggtgatctgattgac
ctgatctggcagcgtgcccaattcgaaaacgcaattgccgtactcaccggtcaaccaccg
gcgcaattcaccctggtgaccacccaggatattccggcgttgccccagattccgctgagt
ctgccatcgcagttgctggagcggcgtcccgatattgcctcggcggagcgttcggtgatt
tccgccaatgccaagatcggtgtggcgaaatcggcgtactacccggacctgagcctgagc
ctgtccggcggttacagcagcagtacctatgccaattggatcagcctgccgaaccgattc
tggtcggtggggcctaaactggcgatgactctgttcgacggcgggcagcgctcggcggaa
gtcgaccgtaccgaggcggtgtatgaccagaccgtcgcgaaataccgccagaccgtgctc
gacggcttccgcgaggtggaaaactacctggtgcagctcaaggtcatggaggacgaagca
gcagtccgccagcaggcactggatgcagcccgtgagtcactgcggctgaccgataaccag
tacaaggccggactgattgcctacctggatgtggtcacggtgcagaccaccgccctgagc
aatgagcgcagcgtactgagcctgctgcaaagccgcttgatcgccagcgtgcagttgatt
gcggcgctcggtggcggctgggacggcaatacggatccgagtgctgcccggtag
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