Pseudomonas amygdali: BKM19_015450
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Entry
BKM19_015450 CDS
T05354
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pamg
Pseudomonas amygdali
Pathway
pamg01501
beta-Lactam resistance
pamg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pamg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BKM19_015450
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BKM19_015450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pamg02000
]
BKM19_015450
01504 Antimicrobial resistance genes [BR:
pamg01504
]
BKM19_015450
Transporters [BR:
pamg02000
]
Other transporters
Pores ion channels [TC:
1
]
BKM19_015450
Antimicrobial resistance genes [BR:
pamg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BKM19_015450
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
BKM19_015450
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
BKM19_015450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DICT
Motif
Other DBs
NCBI-ProteinID:
AVB14825
UniProt:
A0AB35R9F3
LinkDB
All DBs
Position
3121196..3122665
Genome browser
AA seq
489 aa
AA seq
DB search
MTERLAFISRPTGLIRPLALGLCVVLLSACAVGPDYQAPSMAAPAQFKAAEGWRAATPGD
AMAKGAWWEVYRDPQLNSLVERLNTSNQTVAQYDAQYRQAQALVRSSRGAFLPTLDLTTG
KTRSGQGTGTSNTGTNTGASGIRNSYNAQLGVSWEADVWGKLRRGLEADTASAQASLADL
SAMRLSLQSELVQNYLQLRVIDEQKRLLESTVDTYQRSLTLTRNQYRAGISGSDAVAQAL
TQLKSTQADLIDLAWQRAQFENAIAVLMGMAPADFNLPASTSIPQLPQIPPGLPSQLLER
RPDIAAAERSVMAANANIGVAKAAYYPDFTLSMSGGYSSSTFANWISLPNRFWSVGPQLA
LTLFDGGRRTAEVDRTEAVYDQTVAQYRQTVLNGFQEVENYLVQLKVYEQEAAVRQEALV
SARDSLRLTNNQYKAGLIGYLDVVNVQATALSNERSVLNVLQSRLIASVRLIAALGGGWN
AETGLTLRE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacgcctggcctttatatcccgcccgacagggctgattcgtccactcgcgctg
gggctctgcgttgtgctgctcagcgcttgtgctgtcggtcctgattaccaggcgccgtcg
atggccgcgcctgcgcagttcaaggccgccgaaggctggcgtgcagccacacccggtgac
gcgatggccaaaggtgcatggtgggaggtgtacagggatccgcaactgaactcgctggtc
gaacggctcaacacctccaaccagaccgtcgcccagtacgatgcgcagtaccggcaggca
caagcactggtgcgtagctccagaggcgcatttctgccgacactggatctgaccaccggc
aagacccgctcggggcagggcacaggcacatccaataccggtacgaataccggcgcctcg
ggaattcgcaacagttacaacgctcaactgggcgtcagttgggaagccgatgtgtggggc
aagttgcgccgtgggctggaggctgacaccgccagtgcgcaggcaagtcttgcggacctg
tcagcgatgcgcctcagcctgcaatcggagctggtgcagaattatctgcaattgcgggtc
attgacgaacagaaacgcctgctggaatccactgtggacacctatcagcgctccctgacc
ctcacccggaatcaataccgcgccggtatttcaggaagtgacgctgtcgcccaggcgctg
acacagttgaaaagtactcaggccgacttgatcgatctggcctggcagcgtgcacaattc
gagaacgccattgccgtgctgatggggatggcgcccgctgacttcaatctgccggccagc
acttcgattccgcaattgccgcagatcccgccagggctgccgtcacagttgcttgaacgc
cgaccggacattgccgcggccgaacgctcggtcatggccgccaatgccaacatcggcgtc
gccaaggccgcttactacccagacttcacgctgagcatgagcggcggttacagcagcagt
acgttcgccaactggatcagcctgcccaaccgcttctggtcggtagggccgcaactggcg
ttgacgttgttcgacggtggcaggcggacggcggaagttgatcgtaccgaggccgtgtac
gaccagactgtcgcccagtaccggcagaccgtgctgaatggttttcaggaagtcgaaaat
tacctcgttcaactcaaggtctacgagcaggaggccgccgtgcgccaggaagcgctggta
tcggctcgcgactcgttgcgcctgaccaacaaccagtacaaggccgggctgatcggttat
cttgacgtcgtcaacgtacaggccactgctttgagcaatgaacgcagtgtgctgaacgtt
ctgcaaagtcgcttgattgccagcgttcggttgattgccgcattgggtggcggctggaat
gccgaaacaggtttgaccctcagggagtga
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