Polynucleobacter antarcticus: DCO16_02135
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Entry
DCO16_02135 CDS
T08332
Name
(GenBank) hypothetical protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pani
Polynucleobacter antarcticus
Pathway
pani01501
beta-Lactam resistance
pani02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pani00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DCO16_02135
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DCO16_02135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pani02000
]
DCO16_02135
01504 Antimicrobial resistance genes [BR:
pani01504
]
DCO16_02135
Transporters [BR:
pani02000
]
Other transporters
Pores ion channels [TC:
1
]
DCO16_02135
Antimicrobial resistance genes [BR:
pani01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DCO16_02135
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DCO16_02135
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
DCO16_02135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QKM61983
UniProt:
A0A6M9Q178
LinkDB
All DBs
Position
complement(395295..396950)
Genome browser
AA seq
551 aa
AA seq
DB search
MVDLFITKVIAVANKSPAGVSRPQCKRLPLYLACLSLGLSACTSPIIKPGDAPPAAEYVR
WLPKEFRAPVEASLPRPKELWWRDFESDELNQIVETGITNNYDLRVAVARVAQTRAQAGI
VRSAEYPTIDAIGGYSIQAPYPAIGSAPNTAAWSSQGTWQAGALVNYEVNLWGKKGFDTQ
SAYSQALASEFNRDAVTLTLTGDIVTSYFQVVSLNERITVGQRNLDAIQELTRGLGRRVQ
LGDATEIDFFQQTILLNNTRAAVVGLQQQRERAFTRLATLVGITPSTLTVKGVSVDKVRV
PVVEPGLPSDLLCRRPDIRRAEAMLESAKLDLYSARANLLPNFNLTGGAGFGSFLLSTLT
APQSLYYNITSNLLANIFDAGKRQSQIQLASAKNVEMLESYANTVLSSLREVEDSLSGIQ
LTARAYSDLSTSRDKAQRLTVMSQRVVLLGGMDFVQLYEIQRTVFNSEDAAIQARFDQLR
ASVDLFKAIGGGTKLQNDPCLGGTKLPAADARWAEAASKADKIVGPKPNLGIDSKGNMIN
APAPLKQSTPN
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atagtagatctatttataactaaagttattgccgtggccaataaaagtcctgctggtgtt
tcgcgtccccaatgtaaacggctgcctctttatttggcttgtctttccttgggcttgagt
gcttgcacgagccccatcatcaagccaggcgatgcgccacctgctgcagaatatgtacga
tggcttccaaaagaatttagggctccggttgaggcgagcttgccacgcccaaaagaatta
tggtggcgggatttcgagagtgacgagctcaatcaaatagtcgaaaccggtattaccaat
aactatgacttgcgtgtcgccgttgctcgggttgctcaaacgcgtgcccaagcgggtatt
gtgcgatcagctgaatacccaaccattgatgcgattggtggttattccattcaggcgccg
tatccggcgattggatctgctcctaataccgccgcttggtctagtcaaggaacctggcag
gctggggcattggttaactatgaagtgaacttgtggggcaaaaaaggatttgatactcag
tcagcttattctcaggctttagctagcgagtttaatcgtgatgcagtgactctaaccctt
acgggcgatattgtgacttcttattttcaggtagtgtccctgaatgaacgtataacagtc
ggtcagcgaaatttggatgcgattcaggagctgacgagaggtcttggtagacgcgtgcaa
ctaggcgatgctacggaaattgattttttccaacaaacgattcttttgaataatacgcgt
gcagccgttgtaggtttacagcaacagcgtgagcgcgcatttacgcgtttggccacactg
gtgggaataacgccttccacgctgacagtcaaaggagtgtcggttgataaggtgagggta
cctgtcgtagagccaggattgccgtctgatcttctatgcagaaggcctgatattcgacgg
gcagaagcgatgttggaatccgccaagctggatttatattccgctcgagccaatttattg
cctaattttaatttaacgggcggcgctggctttggtagctttcttttatctacactcact
gcaccacaaagtttgtattacaacattactagtaatttattagccaacatttttgatgcg
ggcaaacggcaatcgcaaattcagctggccagtgctaagaacgtagaaatgttggagtct
tatgccaatacggtactgtcttctttgcgagaagttgaggactcactttccggcattcaa
ttgactgctcgtgcgtattcggatttaagtacctcacgcgataaggcgcaacgactgact
gtgatgagtcaacgggtggttcttttaggcggtatggattttgtccagctttatgaaatt
cagcgtacggtatttaactcagaagatgcagcaattcaagcaagatttgatcaattgcgc
gcttcagtcgacttgtttaaggcgatcggcgggggtactaagttacaaaatgatccgtgc
ttaggtggcacaaaattacctgccgcagatgcaagatgggcggaagcggccagtaaggca
gacaaaattgtgggtcccaaacccaatcttggtatcgatagcaagggcaacatgattaat
gcacctgcgccactaaaacaatcgacccctaattaa
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