Pandoraea sp. XJJ-1: OYT13_18540
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Entry
OYT13_18540 CDS
T10414
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
panx Pandoraea sp. XJJ-1
Pathway
panx01501
beta-Lactam resistance
panx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
panx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OYT13_18540
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OYT13_18540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
panx02000
]
OYT13_18540
01504 Antimicrobial resistance genes [BR:
panx01504
]
OYT13_18540
Transporters [BR:
panx02000
]
Other transporters
Pores ion channels [TC:
1
]
OYT13_18540
Antimicrobial resistance genes [BR:
panx01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OYT13_18540
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
OYT13_18540
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
OYT13_18540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WAL85332
UniProt:
A0A9E9IBW9
LinkDB
All DBs
Position
complement(4016845..4018284)
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AA seq
479 aa
AA seq
DB search
MRGIAAPGVCLLALVGGCTLAPTYERPAAPVPTTYEAAPSGTGARLALAEPLAADADWAD
VFTDPALQTLIRRSLAQNRDLRLASLRVQEARALYGIEAANLLPSVQAGGAFSRQRYSGA
AGQPEGRGTAAGYVANDLRATLGVSAFELDFFGRVRSLSDAALQSYLASEEAQRAAQVSL
VAEVATSYIGLVAIDEQIAYAREVLAAREEGIRVVRLRAERGLIDDLDLNAETTQVEVAR
AALAERERQRSEIVHALQVLTGDVSAKPVAAASLDDAFVMPVAAGLPSSLLIRRPDIRQA
EAQLRAANADIGAARAAFFPSIKLTTDVGTASAGIADLFGAGTGVWSFLPQITVPIFTGG
RHRQGLNLANVRKEMAVVSYERAIQTAFAEVDDALTAQGLLSRQFQAQKRVSDGERERLR
LAHHRYTNGVASYLELLDAQRSAFHAAQQLIDVKQRVLVNHVALYRALGGGWQPESGTS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgggatagctgcgcccggcgtgtgtttgctggcattggtcggcggatgcacgttg
gcgccgacctatgagcgcccggcggcaccggtgccgaccacgtacgaggcggcaccgtcg
ggcacaggtgcgcgtctggcgctcgccgagccgctcgcggcagacgcggattgggccgac
gtattcaccgatcccgccttgcagacgctgattcgccgctcgctcgcgcagaatcgcgac
ttgcgcctggcgtcgctacgggtgcaggaagcgcgtgcgctgtatggcatcgaggcggcc
aatctgctgccgagcgtgcaggcaggcggcgcattctcccgtcagcggtactcaggggcc
gcgggccagcctgagggcaggggcaccgccgcaggttacgtcgccaacgacttacgggcg
acgctgggcgtgagcgcctttgaactcgatttcttcgggcgcgtgcgcagcttgagcgac
gcggcgctgcaatcgtatttggcgagcgaggaagcgcaacgggcggcgcaggtgagtctc
gtggcggaagtagccacgtcctacattggactcgtggccatcgacgaacagatcgcctac
gcgcgggaggtgctggcggcacgcgaggagggcattcgcgtggttcgcctgcgcgccgag
cgcgggctgatcgacgatctcgacctgaatgccgagaccacgcaggtcgaagtcgcgcgc
gcagcactcgccgagcgcgagcggcaacgcagcgagatcgtgcacgcgttgcaggtcctg
accggcgacgtgagtgcgaagccagtcgcggcggcatcgctcgacgacgcattcgtcatg
cccgtggccgccggattgccgtcctcgttgctgatacgtcgtccggatattcggcaggcg
gaggcgcaactgcgtgcggccaacgcggatatcggcgccgctcgtgcggcgttcttcccg
tcgatcaagttgacgacggatgtcggcactgccagtgcggggattgcggatctgttcggc
gccggcaccggtgtatggtcgttcctgccgcagattaccgtgccgatctttacgggcggg
cgtcaccggcaagggttgaatctggcgaacgtgcgcaaggagatggccgttgtgtcgtac
gagcgtgcgattcaaacggcgtttgccgaagtggatgacgccctgaccgcgcaagggctg
ctatcgcgccagttccaggcgcaaaagcgcgtgtcggacggcgagcgcgagcggcttcgt
ctggcccatcatcgctataccaacggcgtggcgagctacctcgaactgctcgacgcgcag
cgcagcgcatttcacgcggcgcaacagttgatcgatgtgaagcagcgagtactcgtgaac
catgtggcgctgtaccgagcgttgggcggcggatggcaaccggagagcggcacgtcctga
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