Pantoea sp. SOD02: NR302_16305
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Entry
NR302_16305 CDS
T10895
Symbol
tolC
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
panz Pantoea sp. SOD02
Pathway
panz01501
beta-Lactam resistance
panz01503
Cationic antimicrobial peptide (CAMP) resistance
panz02020
Two-component system
panz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
panz00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NR302_16305 (tolC)
09132 Signal transduction
02020 Two-component system
NR302_16305 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NR302_16305 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
NR302_16305 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
panz02000
]
NR302_16305 (tolC)
02044 Secretion system [BR:
panz02044
]
NR302_16305 (tolC)
01504 Antimicrobial resistance genes [BR:
panz01504
]
NR302_16305 (tolC)
Transporters [BR:
panz02000
]
Other transporters
Pores ion channels [TC:
1
]
NR302_16305 (tolC)
Secretion system [BR:
panz02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NR302_16305 (tolC)
RTX toxin transporter
NR302_16305 (tolC)
Multiple protein transporter
NR302_16305 (tolC)
RaxAB-RaxC type I secretion system protein
NR302_16305 (tolC)
Antimicrobial resistance genes [BR:
panz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
NR302_16305 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
NR302_16305 (tolC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OEP
DisA-linker
Motif
Other DBs
NCBI-ProteinID:
UVC28785
LinkDB
All DBs
Position
3543538..3545010
Genome browser
AA seq
490 aa
AA seq
DB search
MKKLLPLFIGLSLGGFSLASQAENLLQVYQQARLSNPDLRSSAANRDAAFEKINEARSPL
LPQLGLGADYTYNNGYRDSSGLHSNTTSASLQLTQTIFDMSKWRALSLQEKQAGIQDVTY
QVAQQDLILNSATAYFNVLKAIDTLSYTEAQKQSIYRELDQTTQRFNVGLVAITDVQNAR
AQYDTVLANEVTARNNLDNAVESLRQITGMDYLSLASLNIDRFKTARPDAVASLLKEAES
RNLTLLSARLSQDLAREQIRSAETGHMPTLDLTASTGMSNSKYGGSRANQSSGSTDSITG
SNQVGLSFTMPLYSGGSVTSQVKQAQYNYVAASEQLEGAHRSAVQTVRSSFNNVNASISS
IDAYKQAVVSAQSSLDAMEAGYQVGTRTIVDVLDATTTLFNAKQQLSDARYSYLINQLNI
KYALGTLNEQDLQQLNSTLGKEITTTPEVVAPENNQQAARVDNGPKASSPSAAAQARPAA
ARSSGNPFGN
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactgctcccactttttattggactgagcctgggcggattcagccttgccagc
caggcagaaaacctgttgcaggtctatcagcaggcgcgccttagcaaccccgatctgcgc
tcctctgccgctaatcgcgacgcagcatttgagaaaatcaatgaagcgcgtagtccttta
ttgccgcagttaggcttgggcgcagattacacttataacaacggctaccgtgacagcagc
ggacttcattccaacacgaccagcgcctctctgcaattaactcaaactattttcgatatg
tcgaaatggcgtgcgctgtcgctgcaggaaaaacaagccggtattcaggacgtcacttat
caggttgctcagcaagatctgattctgaatagtgcaactgcctatttcaacgtgttgaag
gcgatcgatacgctttcttataccgaagcacagaaacagtcgatctaccgcgaattggat
caaaccactcagcgcttcaacgtaggtttggtcgcgatcactgacgtgcagaacgcccgt
gcacagtatgacaccgtgctggccaacgaagtgaccgcacgtaacaacctcgataatgct
gtggaatcgctgcgtcagattaccggcatggattatctgtcgctggcttctctgaatatc
gatcgtttcaaaaccgcacgtccagatgccgttgccagcctgctgaaagaagcagaaagc
cgcaacctgaccttgctgtctgcgcgtctgagccaggatctggcacgtgagcagattcgt
tcagctgaaaccggccacatgccaacgctggacttgactgcgtcaaccggtatgtcgaac
agcaaatatggcggcagccgcgccaatcaaagtagcggcagcaccgactcgatcaccggt
tctaaccaggttggtctgagcttcaccatgccactgtacagcggcggttcggtgacttca
caggtaaaacaggcgcagtacaactatgtcgcggccagcgagcagctggaaggcgcacat
cgtagcgcggttcagacggtgcgttcttcattcaataacgtgaatgcctccatcagcagc
atcgatgcttacaagcaggcggttgtctctgcacaaagctcattggatgcgatggaagcg
ggttatcaagttggtacgcgtaccatcgttgatgtgctggatgcaaccaccacgctgttc
aacgctaaacagcagctttctgatgcgcgttatagctatctgattaaccagctgaatatc
aaatatgcgctgggtacgctgaacgagcaggatctgcagcagctgaacagcacgctgggc
aaagagatcaccacgacaccagaagtggtggcgccggaaaataaccagcaggccgcgcgt
gtggataacggtccgaaagcgtcatcgccttcagccgccgcacaagcccgtccagctgcc
gcacgcagcagcggaaatccattcggtaattaa
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