Pantoea sp. At-9b: Pat9b_3146
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Entry
Pat9b_3146 CDS
T01386
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pao
Pantoea sp. At-9b
Pathway
pao01501
beta-Lactam resistance
pao02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pat9b_3146
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Pat9b_3146
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pao02000
]
Pat9b_3146
01504 Antimicrobial resistance genes [BR:
pao01504
]
Pat9b_3146
Transporters [BR:
pao02000
]
Other transporters
Pores ion channels [TC:
1
]
Pat9b_3146
Antimicrobial resistance genes [BR:
pao01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Pat9b_3146
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Pat9b_3146
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Pat9b_3146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ADU70443
UniProt:
E6WGN4
LinkDB
All DBs
Position
complement(3460234..3461640)
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AA seq
468 aa
AA seq
DB search
MITKTFNWALLPLAAALGLTGCTMEPHYQRPSMPVDAHYDQPTAVGNVADLPWQNFFADA
TMRNLIQLSLDNNRDLRVAALNVEEARNDVTVQRAALMPSIDATASQTSAHEPGNLYNTK
TTGPVTYHELNAGLGVTSWELDFFGRLRSLRDQAQETYLSTAATERATRISLISEVATAW
LTLCSDNDLLHLAQSTAQSQQDSYRLTKMSYDGGVSSDQDLAESESTVRAAEADVASYTR
QVRQDVDALRLLVGTDLPVSLLSHASLDANWQFPATPAGLPSDLLTRRPDVMAAEHTLKA
ANANIGAARAAFFPSITLTASGGSTSSSLGSLLGAGTGAWSFVPSINLPIFDGGKNQANL
NIAHIEKRIEIANYEKAIQTAFKEVNDALAGQDTWQDQMTALQKEVGANQRDYDYSELRY
KQGVDNYLNVLVAQRSLYSAQQSLISAHLGQLSQKITLYKALGGGWKS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgataactaaaaccttcaattgggcgttgctgccgctggccgccgcacttggcttaacc
ggttgtaccatggagccgcattaccagcggccatcgatgccggtggatgcgcattacgac
cagcccacggcggtgggcaacgtggcggacctgccgtggcagaacttctttgctgacgcc
acgatgcgtaacctgatccagctatcgctcgacaacaaccgcgacctgcgcgtggcggcg
ctaaacgtggaagaggcgcggaacgatgtgacggtacagcgtgcggcattgatgccatcg
attgatgccacggcgagccagacctcggcgcatgagccggggaatctgtacaacaccaaa
accaccggcccggtgacttaccatgagctgaacgccggtcttggcgtcacctcatgggag
ctggatttctttggccgtttgcgcagcctgcgtgaccaggcccaggaaacgtatctctcc
acggcggccacggaacgggccacccgcatctcgctgatctccgaagtggcgaccgcatgg
ctgaccttgtgttcggataatgatctgctgcatctggcgcaaagcaccgcgcagagccag
caggattcataccgtctgaccaagatgagctatgacggtggcgtcagcagcgatcaggat
ctggcggaatcggaaagcacggtgcgtgctgccgaagctgacgtggccagctatacgcgc
caggtacgtcaggacgtcgatgcattgcgtctgctggtgggtaccgatttaccggtgtcg
ctgctgtcacatgcctcgctggacgcgaactggcagttcccggccacgccagccggattg
ccgtcagatttgctgacgcgtcgcccggatgtgatggcggccgagcacaccctgaaagcg
gctaacgccaatattggtgcggcgcgtgctgctttcttcccgagcatcaccctgaccgcc
tcaggcggttcgaccagcagttcgctgggcagcttgctgggtgctggcaccggagcctgg
tcgtttgttccctcgattaatctgcccatttttgacggtggtaaaaatcaggctaacctg
aacatcgcacatatcgagaaacgcatcgagatcgctaactatgaaaaagcgatccaaacg
gcgtttaaagaggtgaacgatgcgctggcgggacaggacacctggcaggatcaaatgacg
gccctgcaaaaagaggtaggtgcgaaccagcgtgactacgactattctgaattgcgctat
aagcagggcgttgataattatctcaatgtgttagttgcccaacgttcgctttacagtgca
caacagtcgttgatcagcgcgcatctgggccaattaagccagaaaatcaccctgtacaag
gcactcggtgggggctggaaatcctga
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