Pantoea sp. At-9b: Pat9b_3919
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Entry
Pat9b_3919 CDS
T01386
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pao
Pantoea sp. At-9b
Pathway
pao01501
beta-Lactam resistance
pao02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pao00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pat9b_3919
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Pat9b_3919
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pao02000
]
Pat9b_3919
01504 Antimicrobial resistance genes [BR:
pao01504
]
Pat9b_3919
Transporters [BR:
pao02000
]
Other transporters
Pores ion channels [TC:
1
]
Pat9b_3919
Antimicrobial resistance genes [BR:
pao01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Pat9b_3919
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Pat9b_3919
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Pat9b_3919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ADU71209
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All DBs
Position
4276458..4277879
Genome browser
AA seq
473 aa
AA seq
DB search
MLAVAVASALLAGCANPHGLHTSNHMLDANTLQAQDTLKNAHFSAANWPKTQWWQSFDDA
QLNHLINDAMAASPDLQVVNAQADKANAQVIAANAERYPDVDLNAGITRSRVAKVDDPLL
QGKTYSTLRTANVGLSYTFDLWGGKKDAAEAALGQARASKLDRQASQLTLAANVTRAWNN
LNLAWTNADLAKQAADRANGIAKIQQQYVSAGLTSDYQYKQALSEQKTAEATLTEAKQDV
TDAGIQLSTLVGKGPDYWHNLKPAKLNVPTAALLPGSIPADLLGRRPDVVAARWRVEAAA
KDIAATKTEFYPNINLVAEAGTRSLLGDALFGAPSRFFNVGPSLSLPIFDAGKRRADLAE
SDANWDLAVAQYNKLLISSLGNVSDTITQLQSIQDQLAQQESANQLIHSAWDDLNREYAA
GLRPYLDVLTIQNQLIESDQKLVALKAQQINLAVVLIEDLGGGFQNSGAAPHS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcagttgctgttgccagcgcgttgctggccggttgtgccaatcctcatggctta
cataccagtaaccacatgcttgatgccaatacgttacaggcacaggacacgctgaaaaat
gcacatttcagcgcggccaactggcctaaaacacaatggtggcaaagctttgatgacgcc
cagctcaatcacctgattaacgatgccatggccgccagcccggatctgcaagtggttaac
gcccaagccgataaggccaatgcacaggtgattgccgccaatgccgagcgctacccggat
gtggatctcaacgccggaattacacgctcgcgtgtggcgaaagtcgacgacccgctgctt
cagggtaaaacctacagcacactgcgtaccgccaacgttgggctgagctacaccttcgat
ttatggggtggtaagaaagatgcagccgaagcggcactcgggcaggcgcgcgccagcaaa
ctggaccgccaggccagccagttaacgctggccgctaacgtgacgcgtgcctggaacaac
ctcaatctggcgtggaccaatgccgacctggcgaagcaggcagcagaccgcgccaatggt
atcgccaaaattcagcagcaatatgtttctgccgggctcacgtctgattatcaatataag
caagcgctgtcggaacagaaaacggccgaagccacgcttacggaagccaaacaggacgtc
actgacgccggcattcagctatcaacactggtcggcaaaggcccggattactggcataac
ctgaagccagcgaaactgaacgtgccgaccgccgcgttgctgccaggcagtatcccagcc
gatctgctcggacgtcgcccggatgtggtggctgcccgttggcgggttgaagccgcagca
aaagacatcgcagcgaccaaaaccgagttctatcccaatatcaacctggtggcagaagcc
ggtacacgctcactgctgggcgacgccttgtttggcgcaccgagtcgcttcttcaatgtt
gggccaagtttgtcgctgccgattttcgatgccggtaaacgccgtgccgatctggcagaa
agcgatgcgaactgggatctggcagtcgcgcaatacaacaagctgctgattagctcgctg
ggcaatgtcagcgataccatcactcagttgcagtccattcaggaccaactggcgcagcag
gaaagcgccaaccagctgatccacagcgcctgggatgacctgaaccgcgagtatgcggcg
ggcctgcgtccttatctggacgtattgaccattcagaatcagttgatcgaatccgaccag
aaactggtggcgcttaaagcccaacagatcaatctggcggtggtgctgattgaagattta
ggtggtggattccagaacagcggcgcggcaccccacagttaa
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