Parabacteroides sp. CT06: CI960_11945
Help
Entry
CI960_11945 CDS
T05011
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
parc
Parabacteroides sp. CT06
Pathway
parc01501
beta-Lactam resistance
parc01503
Cationic antimicrobial peptide (CAMP) resistance
parc02020
Two-component system
parc03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
parc00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CI960_11945
09132 Signal transduction
02020 Two-component system
CI960_11945
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CI960_11945
01503 Cationic antimicrobial peptide (CAMP) resistance
CI960_11945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
parc02000
]
CI960_11945
02044 Secretion system [BR:
parc02044
]
CI960_11945
01504 Antimicrobial resistance genes [BR:
parc01504
]
CI960_11945
Transporters [BR:
parc02000
]
Other transporters
Pores ion channels [TC:
1
]
CI960_11945
Secretion system [BR:
parc02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
CI960_11945
RTX toxin transporter
CI960_11945
Multiple protein transporter
CI960_11945
RaxAB-RaxC type I secretion system protein
CI960_11945
Antimicrobial resistance genes [BR:
parc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
CI960_11945
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
CI960_11945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
PTS_IIA
Motif
Other DBs
NCBI-ProteinID:
AST54007
UniProt:
A0A223HNM4
LinkDB
All DBs
Position
complement(2748958..2750400)
Genome browser
AA seq
480 aa
AA seq
DB search
MVSNIVSYSILLLYLLPCASWSQGNDVDLSLEQSLDLLHKENKSLKIAGKEVEWARNEHQ
KLNAFWYPSVNAAGAFVHMSNPIEVRQSLSKYTEPAKEFVHNYIPDNELIMSVLDKIGQG
TFSLPLISQNITSIDATVTWPVFTGGKRIYANKIGKTMVSIAEVNRNQVDANQQSLLIEA
YFGLRLGQSVVDVKTEVYNSLKTHYDQALKLEQNGMINRAERLFAQVSMDEAKRELESAR
KDLAVAQQAFKSLINMEEGSDVRTTTPLFINEALPPAQYFKDLVPMNNYIVNQLKLQQVV
ADNQLKIGRSAYVPNIALFGKQTLYADGLDKYLLPRTMVGVGFTWNIFDGLNREKTIRQA
KIASQSLRLGKEKAITDLEVGIDKFYSQLQNALDNVKALDTTIEMSRELVRVRKKSFQEG
MATSTEVVDAEVMLAKVKTAFLLAYYQYDVALINLLSVCGTPEQFHQYKMEGKTEELLGN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtaatatagtatcttacagtattcttttgctgtatcttcttccatgcgcttca
tggagccaagggaacgatgtggatttaagcttggaacaatctctcgacctgcttcataag
gaaaataaaagcttgaaaatagccgggaaagaagtggaatgggctcggaatgagcatcaa
aagctaaacgctttttggtatccgtcggtgaacgccgcgggtgctttcgtacatatgtcg
aatccgatagaggtacggcagtcgctgagtaaatatacggaaccggcgaaggagtttgtc
cataattatatcccggataatgagttgatcatgtcggtattggataagatcgggcaaggt
actttctcgcttccgctgatctcccaaaacatcacttctatagacgctacggtgacgtgg
cctgttttcacgggaggaaaacgtatctacgcgaacaagatcggaaagacgatggtctct
atagcggaggtgaataggaatcaagtggatgccaaccaacaatccttactgattgaggct
tatttcgggcttcgtctgggacaaagtgtggtggacgtaaaaacggaagtgtacaattct
ttgaaaacccattatgaccaagcccttaaattagagcaaaacgggatgatcaatcgggcc
gagcgtctgttcgctcaggtaagtatggacgaggcgaaacgagaactggaatcggcccgt
aaggatttagcggtcgctcaacaggcgtttaaaagcttgattaatatggaggaggggagt
gacgtacgtaccacgactcctttattcattaatgaggcgcttcctccggcccaatacttc
aaggatctggttccgatgaataattatatagtcaatcaattgaaattgcagcaggttgta
gccgataatcaactaaagatcggccggtccgcttatgtcccgaatatcgctttattcggc
aaacagactttgtacgctgacggattggataaatatttgctgcctcgtacgatggtggga
gttggttttacgtggaatatctttgacggcttgaatcgggagaaaaccatccggcaggca
aagatcgctagtcagtcgcttcgtttgggtaaggagaaggcgattacggatctggaggtc
ggtatcgataaattctacagccagctacaaaatgccttggacaatgtaaaagctttggat
acgacgatcgagatgagccgggaactggtccgggtgcggaagaaatccttccaagaggga
atggctacttctacggaggtagtcgatgccgaggttatgctggcgaaggtgaagaccgct
tttcttttggcttattatcagtatgatgtagccttgattaatctgctgtctgtctgcggt
acgccggagcagttccaccagtacaagatggagggaaagaccgaggagcttttggggaat
tga
DBGET
integrated database retrieval system
