Pectobacterium aroidearum: I2D83_20280
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Entry
I2D83_20280 CDS
T07244
Symbol
tolC
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
pari
Pectobacterium aroidearum
Pathway
pari01501
beta-Lactam resistance
pari01503
Cationic antimicrobial peptide (CAMP) resistance
pari02020
Two-component system
pari03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pari00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
I2D83_20280 (tolC)
09132 Signal transduction
02020 Two-component system
I2D83_20280 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I2D83_20280 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
I2D83_20280 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pari02000
]
I2D83_20280 (tolC)
02044 Secretion system [BR:
pari02044
]
I2D83_20280 (tolC)
01504 Antimicrobial resistance genes [BR:
pari01504
]
I2D83_20280 (tolC)
Transporters [BR:
pari02000
]
Other transporters
Pores ion channels [TC:
1
]
I2D83_20280 (tolC)
Secretion system [BR:
pari02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
I2D83_20280 (tolC)
RTX toxin transporter
I2D83_20280 (tolC)
Multiple protein transporter
I2D83_20280 (tolC)
RaxAB-RaxC type I secretion system protein
I2D83_20280 (tolC)
Antimicrobial resistance genes [BR:
pari01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
I2D83_20280 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
I2D83_20280 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Csm1
Ribosomal_S5_C
GA
Motif
Other DBs
NCBI-ProteinID:
QPI42723
LinkDB
All DBs
Position
4550957..4552348
Genome browser
AA seq
463 aa
AA seq
DB search
MKKLLPLLIGLSLGGFSAMSQAENLLQVYQQAKSTNPDLRSSAATRDAAFEKINQARSPL
LPQLGLGADYTYNRGYRDSKGVDSNVKGASLQLTQTLFDMSKWRALTLQEKQAGIEDVTY
QTAQQNLMLNTATAYFNVLRAIDSLSYINAQKQAIYRQLDQTTQRFNVGLVAITDVQNAR
AQYDSVLANEVLTRNTLDNALESLRQITGNFYPQLAGLNIERFSTQKPEAVNNLLKEAEN
RNLNLLSARLSQDLAREQIRSAETGYMPTLDLTASTGVSDTRYSGSRTNSGNFNDTDAGQ
HKVGINFTLPLYSGGATNSQVKQAQHSYVSASELLESAHRSVIQTVRSSFNNISASISSI
NAYKQAEVSAQSSLDAMEAGYQVGTRTIVDVLDATTTLYNAKQQLSSARYDYLINQLNIK
SAQGTLNEADLQALNAALGQPVSTTPTVTDNNAPLATTASAQR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattgctccctcttctgattggtctgagcctgggcggttttagcgccatgagt
caggcggaaaacctgttacaggtctaccagcaggcaaaaagcaccaaccctgatttacgc
agctctgcggcaacccgcgacgccgcgtttgaaaagattaatcaagcgcgcagcccatta
ctgccacagttaggtttaggggctgactatacctataacagaggctaccgtgacagcaaa
ggcgtcgacagtaatgtgaaaggcgcttcactgcaattgactcagaccttattcgacatg
tccaaatggcgtgcgctgacgttgcaggaaaaacaagcgggcattgaagacgtcacctat
cagacagcccagcaaaacctgatgctgaatacagcaaccgcctatttcaacgtcctgcgt
gccattgactcactgtcctacatcaatgcgcagaagcaggcgatttatcgccagttggat
caaacgacacagcgtttcaacgtgggtttggttgccattaccgacgttcagaacgcccgt
gcccagtatgacagcgtgttggcaaatgaagtgttgacgcgtaatacgctggataatgcg
ttggaatcactgcgccagattactggcaatttctacccgcagttggccggcctgaacatc
gagcgtttctctacgcagaagcctgaagccgttaacaacctgctgaaagaagctgaaaac
cgcaacctgaacctgctgtccgcacgtttgagccaggatttggcccgtgagcagattcgt
tccgctgaaacaggctacatgccgaccttagatctcactgcatcgacgggcgtgagcgat
acccgttattcaggttcccgcacgaatagcggcaacttcaatgatactgacgctggtcag
cataaagttggtattaacttcactctgccactttatagcggcggcgcgaccaactcacag
gtgaaacaagctcagcacagctacgtcagcgccagcgaactgctggagagcgcacaccgt
tctgttatccagaccgtacgttcatcgtttaacaatatttctgcctccatcagcagcatc
aacgcttacaaacaggctgaagtgtctgcacaaagctctctggatgcgatggaagctggt
tatcaggtaggcacgcgcaccatcgttgacgtactggatgccaccaccacactgtataac
gcgaaacagcagctctccagcgcacgctatgattacctgatcaatcagttaaacatcaaa
tccgcgcagggtacgctgaatgaagccgatctgcaggctctgaatgcggcactgggtcag
ccggtttcaacgacaccgaccgtaacggataacaacgctccgctggcaacaaccgcctcg
gcacagcgttaa
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