KEGG   Paracoccus jeotgali: CYR75_08645
Entry
CYR75_08645       CDS       T05276                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
paru  Paracoccus jeotgali
Pathway
paru03030  DNA replication
paru03410  Base excision repair
paru03420  Nucleotide excision repair
paru03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:paru00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CYR75_08645
   03410 Base excision repair
    CYR75_08645
   03420 Nucleotide excision repair
    CYR75_08645
   03430 Mismatch repair
    CYR75_08645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:paru03032]
    CYR75_08645
   03400 DNA repair and recombination proteins [BR:paru03400]
    CYR75_08645
Enzymes [BR:paru01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     CYR75_08645
DNA replication proteins [BR:paru03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CYR75_08645
DNA repair and recombination proteins [BR:paru03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     CYR75_08645
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CYR75_08645
   MMR (mismatch excision repair)
    DNA ligase
     CYR75_08645
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CYR75_08645
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD Nlig-Ia PTCB-BRCT HHH
Other DBs
NCBI-ProteinID: AUM75622
UniProt: A0A2K9MJH5
LinkDB
Position
complement(1775556..1777808)
AA seq 750 aa
MAWAREETAAAELTPAQAEQRIAALSAFVAQANLDYHQQDAPTISDADYDHAKRRLQALE
TAFPDLAQPDSPSAQVGAAPSDAFGKVAHAQRMMSLENAFAEDEIADFVTRIRSFLNLPA
ETQLSFTAEPKIDGLSLSLRYEGGRLTQAATRGDGMIGENVTANALTIPDIPKTLAGDPP
EILEVRGEVYMSHADFAALNASDSGRTFANPRNAAAGSLRQLDPAITAARPLRFFAYAWG
QVSAPFADTQIGAIEALEGFGFQVNPLTRLCHDTTEMLAHYARIEAQRATLGYDIDGVVY
KVNDLGLQARLGFRSTTPRWAIAHKFPAETAWTRLREIEIQVGRTGALSPVARLDPVTVG
GVTVSNATLHNEDYIAGLNSMGERIRGTDIRPGDWVQVYRAGDVIPKIADVDESRRPLNT
APYVFPETCPECGSDAIREPGDAVRRCTGGLICPAQAIEKLKHFVSRAAFDIEGLGARQI
EAFYHDDSLPIRTPADIFTLQARDAAGLARLKNREGWGETSARNLFDAIEARRRIGLARL
IYALGIRHVGEVAASDLARHFTSWSAFAQTVDAAIPAAERQLQADEAVLQERTVAAAEGR
RARISQTREQVLAAEPALPADALAAYAELTSIDGIGDVVAQSLCATFAQTRERAEIEALL
THLQVLDAEAPATEGSPIAGKTIVFTGTLERMTRAEAKARAEALGAKVAGSVSARTDLVV
AGPGAGSKGAKAQALGVEVIDEDAWLRLIE
NT seq 2253 nt   +upstreamnt  +downstreamnt
atggcatgggcgcgtgaggaaaccgccgctgctgagctgacgccggctcaggcagagcag
cgcatcgcggcgctgtcggcctttgtggcgcaggccaatctggactatcaccagcaggac
gcgccgacgatcagcgacgccgattacgaccacgccaaacgccggttgcaggcgctcgaa
accgcgtttccggatctcgcgcagcccgacagcccctcggcgcaggtcggggccgcgccc
tctgacgccttcggcaaggtcgcccatgcgcagcgcatgatgtcgctggagaacgccttt
gccgaggacgagatcgccgatttcgtcacccgcatccgcagcttcctgaacctgccggcc
gagacccagctaagcttcaccgccgagccaaagatcgacggcctctcgctctcgctgcgt
tacgagggcgggcggctgacccaggccgccacccgtggcgacggcatgatcggcgagaac
gtgaccgccaacgcactgaccattccggatatccccaagaccctcgccggcgatccgccc
gaaatcctcgaggtccggggcgaggtctatatgagccacgccgattttgccgcgctcaac
gccagcgacagcggccggaccttcgccaatccgcgcaatgccgcggcgggctcgctgcgc
cagcttgatccggccatcaccgccgcccgtccgctgcgctttttcgcctatgcctggggg
caggtcagcgcgccctttgccgacacccagatcggcgccatcgaggcgttggagggtttc
ggctttcaggtcaacccgctgacccggctctgccacgacacgaccgagatgctggcccat
tacgcccggatcgaggcgcaacgtgcgacgcttggctatgacatcgacggcgtggtctac
aaggtgaacgaccttgggctgcaggcccggctgggctttcgctcgaccacgccgcgttgg
gccatcgcccacaagttcccggccgaaaccgcctggacccggctgcgcgagatcgagatc
caggtcggccgcaccggcgcgctctccccggtcgcgcggctcgatccggtgacggtgggg
ggcgtgacggtctcgaacgcgaccttgcataatgaggattacatcgccgggctgaacagc
atgggcgagcggatccgggggaccgatatccgccccggcgactgggtgcaggtctatcgc
gccggcgacgtgatccccaagattgccgatgtcgacgagtcccgccgaccgctgaatacc
gccccctatgtctttcccgagacctgcccggaatgcggttccgacgcgatccgagagccg
ggcgatgccgtgcggcgctgcacgggcgggttgatatgtcccgcgcaggcgattgaaaaa
ctgaagcatttcgtcagccgcgcggctttcgacatcgaggggctgggcgcccgccagatc
gaggcgttctatcacgacgacagcctgccgatccgcacccccgccgacatcttcaccctg
caggcacgcgacgccgccgggctggcgcggctgaagaatcgcgagggctggggcgagacc
tcggcccgcaacctcttcgacgccatcgaggcgcgccggcggatcggtctggcgcggctg
atctatgcgttgggcatcaggcatgtgggcgaggtcgcggccagcgatctggcccggcac
ttcacctcgtggagcgcgtttgcgcagaccgtcgatgccgcgatccccgccgccgagcgt
cagcttcaggccgatgaggcggttctgcaggaacgcaccgtcgccgccgccgagggccgt
cgtgcgcggatatcgcagacccgcgagcaggtgctggccgccgagccggcgctgccggcg
gacgcgttggcggcctatgcagagctgacctcgatcgacgggatcggcgatgtcgtggcc
caatcgctgtgcgcgaccttcgcccagacccgcgaacgggccgagatcgaggcgctgctg
acgcatctgcaggtcctcgacgccgaggccccggcgaccgagggcagccccatcgccggc
aagaccatcgtctttaccggcacgctggaacgcatgacccgcgccgaggccaaggcccgg
gccgaggcgctgggtgccaaggtcgcggggtcggtctcggccaggaccgatctggtcgtc
gcggggccgggggcgggatccaagggcgcgaaggcgcaggctttgggggtcgaggtgatt
gacgaggacgcatggctgcgcctgatcgaatag

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