Paraglaciecola sp. T6c: Patl_3599
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Entry
Patl_3599 CDS
T00372
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat01501
beta-Lactam resistance
pat02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Patl_3599
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Patl_3599
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pat02000
]
Patl_3599
01504 Antimicrobial resistance genes [BR:
pat01504
]
Patl_3599
Transporters [BR:
pat02000
]
Other transporters
Pores ion channels [TC:
1
]
Patl_3599
Antimicrobial resistance genes [BR:
pat01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Patl_3599
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Patl_3599
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Patl_3599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
UBA_6
Motif
Other DBs
NCBI-ProteinID:
ABG42101
UniProt:
A0A9J9BCJ4
LinkDB
All DBs
Position
complement(4335236..4336594)
Genome browser
AA seq
452 aa
AA seq
DB search
MYLYKPMAMLLIAVTCGLAACSSQPSYKAKDTEQLLKQHEQWQYTQQNAQQVTYLTDLVS
IDELKPIIAQALANNPSYNQMRVALKLAYAQRQVTAANQWFNVNADVNAQRSEEEGTQYS
SSLGVSWEADVWQKNADSVSAQDMTIASTQADYQGARDTLVASVIRTYLNIILRQDLLDI
EQQRLVMLENNEQSIIERYQLGLGDLEALDTARTSTASTRATIADYVEQIAQSKRAIEVL
LGVDTLDDLFVSSTMPNVLQPLANLPVQDLSRRPDLQSAFYQIEAKRYLVDVSYKALLPS
ITLSASLSDLANTPSEALLKSPLWTLLGNLSAPLFQGGALRAQIDIAKLNAEQAFWNYQD
TLLTAVNEVENALGQEQSLKTQQAQINSALQSAQRSFSNYQSKYQQGLVDILELLTVQQT
VYDLQVQLAQLNYTLQTNRIDLGLALGLGVSS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtacctctacaagcctatggcgatgctattaatcgccgttacctgcgggttggccgcg
tgcagcagtcaacctagctacaaagccaaagatactgagcaactgcttaaacagcacgag
cagtggcaatacactcagcaaaatgcacagcaggttacttatctaacagatctggttagc
attgacgaacttaagccgattattgcccaagcattggcgaataacccatcttataaccaa
atgcgggtggccttgaaattggcttatgcacaacgtcaagtcacggcggcgaaccaatgg
tttaatgtgaatgcagatgttaacgctcagcgcagcgaagaagaaggtacgcaatattca
tcatcattaggtgtgagctgggaagccgacgtatggcaaaaaaatgctgacagcgtttcg
gctcaagacatgactattgcaagtactcaagcggattatcaaggtgcgcgcgatacgctg
gtggccagtgtcatacgcacttatctgaacatcattttacgccaagacctactcgatatt
gaacagcaacgcttagtgatgctagaaaacaacgagcaaagcataatcgagcgttatcaa
cttgggttaggtgatttagaagcgcttgatacggcgcgcaccagcacggcttcaacgagg
gcaaccatcgctgattacgttgaacaaattgctcagtcaaaacgcgctattgaagtgcta
ttgggggttgatacgttggacgatctcttcgtctcatcaacaatgcctaatgtgctgcaa
cccttggctaacctccccgtacaagatttgtctcgtcgtcctgatctacaaagtgcgttt
tatcaaattgaagcaaagcgatatttggtggatgtatcttataaagcgctattaccgtca
attactttatcggcatcactgagcgatttagccaatacacccagcgaagccttactgaag
agtccgttgtggacgttattgggcaatttaagcgccccgttatttcaaggaggcgcactt
cgtgctcaaattgatatcgcaaaactcaatgccgaacaggcattttggaactatcaagac
acactattaacggccgttaacgaagtagaaaatgccttagggcaagagcaatcccttaag
acccagcaagcgcaaatcaacagtgcattgcaaagcgcccagcgcagcttcagtaactat
caaagcaaataccagcaaggtttagtcgacattttagaattactcacagtgcaacaaact
gtgtatgacctgcaagttcaactagcacaacttaattacaccctacaaaccaatcgcatt
gatttaggcctcgcactgggccttggagtatcttcatga
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