Paraglaciecola sp. T6c: Patl_3798
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Entry
Patl_3798 CDS
T00372
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pat
Paraglaciecola sp. T6c
Pathway
pat01501
beta-Lactam resistance
pat02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pat00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Patl_3798
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Patl_3798
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pat02000
]
Patl_3798
01504 Antimicrobial resistance genes [BR:
pat01504
]
Patl_3798
Transporters [BR:
pat02000
]
Other transporters
Pores ion channels [TC:
1
]
Patl_3798
Antimicrobial resistance genes [BR:
pat01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Patl_3798
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Patl_3798
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Patl_3798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Synapsin_N
CsoSCA_N
Tnp_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
ABG42298
UniProt:
A0A9J9EQF2
LinkDB
All DBs
Position
complement(4577790..4579178)
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AA seq
462 aa
AA seq
DB search
MAPDYERSELPIASDWAQQQSKTLEQTSGLTSQKAAELPWRQFIHEPRLTQVIELALSSN
RSLRETLADVESARATYRIQKADLYPQITAGLSGTRAKSSDGDISTLYQAEAGLSGYEID
LFGKNRSLSEADMQSYLASAETAKAAQIALIGEVANAWLTLASDSSLLSLAKETAANAQK
TMEITQKRLELGVDSKIDLASAQTVYHTARSDIASFNTQVEQDINALRLLVGQQIDATVL
PSALPDDADFVSDVPAGLSSDVLLQRPDVLSAEHDLKSANADIGAARAAFFPSLSLTATG
GLASSVLADIFSGGASSIWTLAPSLNIPIFTGGANDAQLAFTQAQKQKFLAAYEYTIQSA
FSEVADALARKATIQEQLDAQEALVAAATRSYDLSLARYKGGVDSFQNALEAQRTMYSAS
QTLISTRQTDLVNRVTLYRVLGGGLADTGNADVVANNADYNP
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcaccagactacgaacgctcggaattacccatagcgagcgattgggcgcaacagcaa
agcaaaacactggagcaaacgtcagggttaacatcgcaaaaagcggctgagttaccttgg
aggcaatttattcacgagcctcgcttaacccaagtgatagagctggcgcttagcagcaac
agaagtttacgtgaaactttggctgacgttgaatcagctcgtgctacctatcgtattcaa
aaagcagatctatacccgcagataactgcaggattaagtggtacacgagcgaaatcatct
gatggtgacatttcaaccttgtatcaggcagaagcgggtctgagtggttacgagattgac
ttattcggtaaaaaccgcagcttgagcgaagcggatatgcaaagttacttagccagtgct
gaaaccgctaaggcagcacagattgccttaattggggaagtggctaatgcttggttgacg
cttgcatctgacagcagtttgctcagccttgcaaaagaaacagcggccaacgcgcaaaaa
acaatggagatcacccaaaaacgcttggagttaggagttgattctaagattgatttggcc
agtgcacagaccgtatatcatacagctcgctctgatattgccagtttcaacacccaagta
gaacaagatatcaatgctttgcgcttattggttggtcagcaaattgatgccacagtgttg
cccagtgcgttaccggatgatgccgatttcgtgagtgatgttccagctgggctatcgtct
gatgtgttattacaacgacccgatgtactttcagcagagcacgatttgaaatcagcaaat
gcagatatcggtgccgctagagccgcatttttcccgtctttatcgttaacagctacaggt
gggttagcaagctcggtgttagcggatatcttcagtggtggcgcaagctcaatctggaca
ttggcgccgagtttgaacattcctattttcactggcggtgcgaacgatgcccaattggcg
tttacccaggctcaaaaacagaaattcttagcggcttatgaatatacgattcaaagtgcg
ttttcagaagtggctgatgccttagcgcgtaaagcgaccattcaggaacaactcgatgca
caagaggcattggttgcagcagcaacacgcagctatgacttatcacttgcgcggtataaa
ggtggcgtggacagtttccaaaatgcactagaggcgcagcgtactatgtacagtgcgagc
caaacattgattagtactcgccaaacagatctcgtcaacagggttactctatatcgcgta
ttaggtggtggcttagctgatactggcaacgctgatgttgtggccaataacgcggattat
aatccttaa
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