Pseudomonas atacamensis: JWU58_10500
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Entry
JWU58_10500 CDS
T07336
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pata
Pseudomonas atacamensis
Pathway
pata01501
beta-Lactam resistance
pata02024
Quorum sensing
Module
pata_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JWU58_10500
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JWU58_10500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pata02000
]
JWU58_10500
01504 Antimicrobial resistance genes [BR:
pata01504
]
JWU58_10500
Transporters [BR:
pata02000
]
Other transporters
Pores ion channels [TC:
1
]
JWU58_10500
Antimicrobial resistance genes [BR:
pata01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JWU58_10500
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
JWU58_10500
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
JWU58_10500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DivIC
Motif
Other DBs
NCBI-ProteinID:
QSL89694
LinkDB
All DBs
Position
2298620..2300089
Genome browser
AA seq
489 aa
AA seq
DB search
MSANTLRSSLTLLLSAMILAGCANYSALDTEGQRLDAKSLKTAQSLDGITLSPAAWPKSD
WWSSLGDPQLDGLIREALHDSPDMQIAAARAHQASAAAYAADAERYPTLDASAGISRSRL
ARDQDPLGQGGAYATVRNVSAGFNYNFDLWGGQRDAWEAALGEARAAEVDRQAAQLTLAA
DVARAYSDLGQAHIVYDLASEDLKRTRQMLDLSQRRLSSGIDSQYQFQQTQSLEASSQAS
LIDAEKRLNSAKIALAVLLGKGPDRGNEIARPKVLQASAVAVPSVLPAELLGRRPDLVAA
RWRVEAASKDIDAAKTRFYPNLNLSASAGAESLLGDAMFGSASRFFNIAPTVSLPIFDGG
RLRANLDARDADYDLAVAQYNKSLVKALGDVGDTINQLRDIGRQIGAQQHATDIAQDSYN
TVVQRYGSGIGNYLDVLSIEQQLLQAQRQLATLNAEQIDLSIQLMQALGGGFQGENLNAA
NASPASSHY
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctaacactttgcgcagcagcctgacgctgttgctatcggcgatgatcctcgcc
ggttgcgccaattacagcgccctcgacaccgaaggccagcgcctcgacgcgaagagcctg
aagacagcgcagtctctcgatggcatcaccctgtcgccagcggcgtggccgaaaagcgat
tggtggagcagcctcggcgatccgcagctcgacggcctgatccgcgaagccctgcacgac
agcccggacatgcagatcgccgcagcccgcgcccatcaggccagtgccgccgcctatgcc
gccgatgccgagcgttatccgaccctcgacgccagcgccggcatcagccgttcgcggctg
gctcgtgatcaggatccgctggggcagggcggcgcctatgcgacggtgcgcaatgtcagc
gccggtttcaattacaacttcgacttgtggggcggtcagcgcgatgcctgggaagccgca
ctcggcgaggctcgcgctgctgaagtcgaccgtcaggccgcgcagctgacacttgccgct
gacgtcgcccgtgcgtatagcgatctcggtcaggcgcacatcgtttacgacctcgccagc
gaagacctcaagcgcacccggcaaatgctcgacctcagccagcgccgcttgagttcggga
atcgacagccagtaccagttccagcaaacccagagtctggaagccagttctcaggccagc
ctgatcgacgcggaaaaacgcttgaacagcgcgaaaatcgccttggccgtattgctcggc
aaaggcccggatcgtggcaacgaaatcgctcgaccgaaagtcctgcaagccagcgccgtg
gcggtgccgtcggtgttgccggcggaactgctcggacgccgcccggatctggtcgcggcg
cgctggcgtgtcgaggcggcgagcaaagacatcgatgcggcgaaaacccgtttctatccc
aacctcaatctgtcggcctcggccggcgccgagtcgttgctgggtgatgcgatgttcggt
tcggccagccgcttcttcaacatcgcgccgaccgtatcgctgccgatcttcgatggcgga
cgcctgcgcgccaacctcgatgcccgcgacgccgattacgatctggcggtggcgcagtac
aacaaaagcctggtgaaagccctcggcgatgtcggcgatacgatcaatcagctgcgcgat
atcggccggcagatcggcgcgcagcaacacgccaccgacattgctcaggactcttacaac
accgtcgtccagcgttacggttccggcatcggcaactacctggacgtgctcagcatcgag
cagcaattgctccaggcccagcgtcagctggcgaccctcaatgccgagcagatcgacctg
tcgattcaactgatgcaagcgctgggcggcggctttcagggtgaaaacctgaacgcagcc
aacgccagccccgcctcgtcgcactactaa
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