Pseudomonas atacamensis: JWU58_22840
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Entry
JWU58_22840 CDS
T07336
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pata
Pseudomonas atacamensis
Pathway
pata01501
beta-Lactam resistance
pata02024
Quorum sensing
Module
pata_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JWU58_22840
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JWU58_22840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pata02000
]
JWU58_22840
01504 Antimicrobial resistance genes [BR:
pata01504
]
JWU58_22840
Transporters [BR:
pata02000
]
Other transporters
Pores ion channels [TC:
1
]
JWU58_22840
Antimicrobial resistance genes [BR:
pata01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JWU58_22840
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
JWU58_22840
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
JWU58_22840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QSL86984
LinkDB
All DBs
Position
complement(5002071..5003570)
Genome browser
AA seq
499 aa
AA seq
DB search
MPRRINRALLPLSVLALTLALGGCISTQGIAPHGEALAADSLATDAAIAEAAKDAHWPSA
QWWQAFGDAQLDRWIDLAVQGSPSMAMAAARVRQAKAMAGVAEAAEALQINGESTLKRHN
WPTDQFYGPGELANTTTWDNNAALGFSYAFDLWGRERNASERAVDLAHVSVAEARLAQLE
LQNNIVRAYIELSLHYAQREIVAAMLKQQQQILDLAQKRLSGGIGTHFEVSQAETPLPET
HRQLDALDEEIALSRNQIAALAGKGPGAAAQLQRPTLSLAAPLKLPSALPAELLGQRPDV
VASRWQVAAQARGIDVAHGGFYPNVDLVGSLGYMATGGGALEFLTGKKLNYNLGPAISLP
IFDGGRLRGELGEAAAGYDIAVAHYNQTLINALKNISDQLIRRESMDKQQDFAAESVAAA
QKTYDIAMIAYQRGLTDYLNVLNAQTLLFKQQQVQQQVQAARLSAHAELVTALGGGLGAG
DDVPTAEQTQAPKTPALLR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcgtcgcatcaacagagcgcttttgccgctcagtgttctggctttaaccctggct
ctcggcggctgcatctctacccaaggcattgcccctcacggcgaggcgctcgcggccgat
tcactggccaccgacgcggccattgccgaggccgccaaagacgcccactggcccagcgcc
caatggtggcaggcgtttggtgacgcgcaacttgatcgctggatcgacctcgccgtgcaa
ggcagcccgagcatggccatggccgctgcgcgggtgcgtcaggccaaggccatggccggt
gttgccgaagcggccgaggcgttgcagatcaatggcgagtcgaccctcaagcgccacaac
tggccgaccgatcagttctacggccccggcgaactggccaataccaccacatgggacaac
aacgccgcgctcggcttcagttacgccttcgacctctggggccgcgagcgcaatgccagt
gaacgcgcggtggatctggcccatgtgagtgtggccgaggcgcgcctggcgcaactggaa
ctgcagaacaacatcgtccgcgcctacatcgagctgtcgctgcattacgcccagcgcgaa
atcgttgccgcaatgctcaaacagcaacagcagattctcgatctggcgcagaagcgtttg
agcggtggcatcggcacgcatttcgaagtcagccaagccgaaacgccgttgccggaaacc
catcgccaactcgatgcgctggacgaggaaattgccctgagccgcaaccagattgctgcg
ctggccggtaaaggcccgggcgccgctgcgcaactgcaacggccgacgctgtccctcgcg
gcaccgttgaagttgccctcggcattgcccgccgaactgctcggccagcgtccggacgtg
gtcgccagtcgctggcaagtggcggcgcaggcgcgcggcatcgatgtcgcccacggcggt
ttctaccccaacgtcgatctggtcggcagcctcggctacatggccacgggtggcggcgcg
ctggagtttctgaccggcaagaaactcaactacaaccttggcccggcgatctcgttgccg
atcttcgacggcggtcgactgcgtggcgaattgggcgaagcggcggccggttatgacatc
gccgtggcgcactacaaccagaccctgatcaacgcgctgaagaacatttccgatcagttg
atccgccgcgagtcgatggacaagcagcaggacttcgccgccgaatccgtggctgccgcg
cagaagacttacgacatcgcgatgatcgcctaccaacgcggcctcaccgattacctcaat
gtgctgaatgcgcagaccttgctgttcaaacagcagcaagtgcagcagcaggtccaggcg
gcgcggttgagtgcgcatgccgagctggtgactgccttggggggtggcctcggtgcgggt
gatgacgtaccgacagccgagcagacccaagccccgaaaaccccggcgctgctgcgttga
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