KEGG   PATHWAY: afy03440
Entry
afy03440                    Pathway                                
Name
Homologous recombination - Acidihalobacter ferrooxydans
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
afy03440  Homologous recombination
afy03440

Other DBs
GO: 0000724
Organism
Acidihalobacter ferrooxydans [GN:afy]
Gene
BW247_10480  single-stranded-DNA-specific exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
BW247_13935  single-stranded DNA-binding protein [KO:K03111]
BW247_05460  hypothetical protein [KO:K03111]
BW247_00015  DNA replication/repair protein RecF [KO:K03629]
BW247_09560  DNA repair protein RecO [KO:K03584]
BW247_06965  recombination protein RecR [KO:K06187]
BW247_03315  recombinase RecA [KO:K03553]
BW247_00465  DNA polymerase I [KO:K02335] [EC:2.7.7.7]
BW247_10030  Holliday junction branch migration protein RuvA [KO:K03550]
BW247_10025  Holliday junction branch migration DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
BW247_10035  crossover junction endodeoxyribonuclease RuvC [KO:K01159] [EC:3.1.21.10]
BW247_00310  ATP-dependent DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
BW247_05025  hypothetical protein [KO:K03655] [EC:5.6.2.4]
BW247_13705  exodeoxyribonuclease V subunit beta [KO:K03582] [EC:3.1.11.5]
BW247_13710  exodeoxyribonuclease V subunit gamma [KO:K03583] [EC:3.1.11.5]
BW247_13700  exodeoxyribonuclease V subunit alpha [KO:K03581] [EC:3.1.11.5]
BW247_09530  DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
BW247_00010  DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
BW247_04895  DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
BW247_06955  DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
BW247_10810  DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
BW247_11555  DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
BW247_03220  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
BW247_09215  hypothetical protein [KO:K02339] [EC:2.7.7.7]
BW247_11050  primosomal protein N' [KO:K04066] [EC:5.6.2.4]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
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