KEGG   PATHWAY: azs00920
Entry
azs00920                    Pathway                                
Name
Sulfur metabolism - Azospirillum sp. TSH100
Description
Sulfur is an essential element for life and the metabolism of organic sulfur compounds plays an important role in the global sulfur cycle. Sulfur occurs in various oxidation states ranging from +6 in sulfate to -2 in sulfide (H2S). Sulfate reduction can occur in both an energy consuming assimilatory pathway and an energy producing dissimilatory pathway. The assimilatory pathway, which is found in a wide range of organisms, produces reduced sulfur compounds for the biosynthesis of S-containing amino acids and does not lead to direct excretion of sulfide. In the dissimilatory pathway, which is restricted to obligatory anaerobic bacterial and archaeal lineages, sulfate (or sulfur) is the terminal electron acceptor of the respiratory chain producing large quantities of inorganic sulfide. Both pathways start from the activation of sulfate by reaction with ATP to form adenylyl sulfate (APS). In the assimilatory pathway [MD:M00176] APS is converted to 3'-phosphoadenylyl sulfate (PAPS) and then reduced to sulfite, and sulfite is further reduced to sulfide by the assimilatory sulfite reductase. In the dissimilatory pathway [MD:M00596] APS is directly reduced to sulfite, and sulfite is further reduced to sulfide by the dissimilatory sulfite reductase. The capacity for oxidation of sulfur is quite widespread among bacteria and archaea, comprising phototrophs and chemolithoautotrophs. The SOX (sulfur-oxidation) system [MD:M00595] is a well-known sulfur oxidation pathway and is found in both photosynthetic and non-photosynthetic sulfur-oxidizing bacteria. Green sulfur bacteria and purple sulfur bacteria carry out anoxygenic photosynthesis with reduced sulfur compounds such as sulfide and elemental sulfur, as well as thiosulfate (in some species with the SOX system), as the electron donor for photoautotrophic growth. In some chemolithoautotrophic sulfur oxidizers (such as Thiobacillus denitrificans), it has been suggested that dissimilatory sulfur reduction enzymes operate in the reverse direction, forming a sulfur oxidation pathway from sulfite to APS and then to sulfate.
Class
Metabolism; Energy metabolism
Pathway map
azs00920  Sulfur metabolism
azs00920

Module
azs_M00021  Cysteine biosynthesis, serine => cysteine [PATH:azs00920]
Other DBs
GO: 0006790
Organism
Azospirillum sp. TSH100 [GN:azs]
Gene
E6C72_13135  sulfate ABC transporter substrate-binding protein [KO:K23163]
E6C72_13130  cysT; sulfate ABC transporter permease subunit CysT [KO:K02046]
E6C72_13125  cysW; sulfate ABC transporter permease subunit CysW [KO:K02047]
E6C72_13120  sulfate ABC transporter ATP-binding protein [KO:K02045] [EC:7.3.2.3]
E6C72_15895  tauA; taurine ABC transporter substrate-binding protein [KO:K15551]
E6C72_15885  ABC transporter permease subunit [KO:K15552]
E6C72_15890  tauB; taurine ABC transporter ATP-binding subunit [KO:K10831] [EC:7.6.2.7]
E6C72_09905  ABC transporter substrate-binding protein [KO:K15553]
E6C72_11415  transporter substrate-binding domain-containing protein [KO:K15553]
E6C72_16110  ABC transporter substrate-binding protein [KO:K15553]
E6C72_16120  ABC transporter substrate-binding protein [KO:K15553]
E6C72_16140  ABC transporter substrate-binding protein [KO:K15553]
E6C72_16160  aliphatic sulfonate ABC transporter substrate-binding protein [KO:K15553]
E6C72_17850  ABC transporter substrate-binding protein [KO:K15553]
E6C72_21470  transporter substrate-binding domain-containing protein [KO:K15553]
E6C72_24370  ABC transporter substrate-binding protein [KO:K15553]
E6C72_29450  twin-arginine translocation signal domain-containing protein [KO:K15553]
E6C72_09910  ABC transporter permease [KO:K15554]
E6C72_11420  ABC transporter permease [KO:K15554]
E6C72_16100  ABC transporter permease [KO:K15554]
E6C72_16150  ABC transporter permease subunit [KO:K15554]
E6C72_16180  ABC transporter permease subunit [KO:K15554]
E6C72_21460  ABC transporter permease subunit [KO:K15554]
E6C72_24365  ABC transporter permease [KO:K15554]
E6C72_09915  ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
E6C72_11425  ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
E6C72_16105  ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
E6C72_16145  ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
E6C72_16175  ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
E6C72_21465  ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
E6C72_21525  ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
E6C72_24360  ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
E6C72_16135  LLM class flavin-dependent oxidoreductase [KO:K04091] [EC:1.14.14.5 1.14.14.34]
E6C72_25110  ssuD; FMNH2-dependent alkanesulfonate monooxygenase [KO:K04091] [EC:1.14.14.5 1.14.14.34]
E6C72_25125  msuE; FMN reductase [KO:K00299] [EC:1.5.1.38]
E6C72_08155  cysC; adenylyl-sulfate kinase [KO:K00955] [EC:2.7.7.4 2.7.1.25]
E6C72_30195  cysN; sulfate adenylyltransferase subunit CysN [KO:K00955] [EC:2.7.7.4 2.7.1.25]
E6C72_08160  sulfate adenylyltransferase subunit 2 [KO:K00957] [EC:2.7.7.4]
E6C72_30200  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
E6C72_10850  cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ [KO:K01082] [EC:3.1.3.7]
E6C72_08165  phosphoadenylyl-sulfate reductase [KO:K00390] [EC:1.8.4.8 1.8.4.10]
E6C72_17520  quinoprotein dehydrogenase-associated SoxYZ-like carrier [KO:K17226]
E6C72_22470  quinoprotein dehydrogenase-associated SoxYZ-like carrier [KO:K17226]
E6C72_08180  nitrite/sulfite reductase [KO:K00381] [EC:1.8.1.2]
E6C72_09675  sulfurtransferase [KO:K01011] [EC:2.8.1.1 2.8.1.2]
E6C72_14120  sulfurtransferase [KO:K01011] [EC:2.8.1.1 2.8.1.2]
E6C72_07250  cysE; serine O-acetyltransferase [KO:K00640] [EC:2.3.1.30]
E6C72_17810  cysE; serine O-acetyltransferase [KO:K00640] [EC:2.3.1.30]
E6C72_26520  cysE; serine O-acetyltransferase [KO:K00640] [EC:2.3.1.30]
E6C72_00230  cysE; serine O-acetyltransferase [KO:K00640] [EC:2.3.1.30]
E6C72_13040  serine acetyltransferase [KO:K00640] [EC:2.3.1.30]
E6C72_06165  cysK; cysteine synthase A [KO:K01738] [EC:2.5.1.47]
E6C72_09685  cysteine synthase A [KO:K01738] [EC:2.5.1.47]
E6C72_11360  PLP-dependent cysteine synthase family protein [KO:K01738] [EC:2.5.1.47]
E6C72_16875  homoserine O-acetyltransferase [KO:K00641] [EC:2.3.1.31 2.3.1.46]
E6C72_17605  homoserine O-acetyltransferase [KO:K00641] [EC:2.3.1.31 2.3.1.46]
E6C72_21120  aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [KO:K01739] [EC:2.5.1.48]
E6C72_09510  metZ; O-succinylhomoserine sulfhydrylase [KO:K10764] [EC:2.5.1.-]
E6C72_25130  sfnG; dimethyl sulfone monooxygenase SfnG [KO:K17228] [EC:1.14.14.35]
E6C72_05640  acyl-CoA synthetase [KO:K20034] [EC:6.2.1.44]
E6C72_29210  long-chain-fatty-acid--CoA ligase [KO:K20034] [EC:6.2.1.44]
E6C72_05655  acyl-CoA dehydrogenase [KO:K20035] [EC:1.3.99.41]
E6C72_06465  acyl-CoA dehydrogenase [KO:K20035] [EC:1.3.99.41]
E6C72_19585  acyl-CoA dehydrogenase [KO:K20035] [EC:1.3.99.41]
Compound
C00033  Acetate
C00042  Succinate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00065  L-Serine
C00084  Acetaldehyde
C00087  Sulfur
C00094  Sulfite
C00097  L-Cysteine
C00155  L-Homocysteine
C00224  Adenylyl sulfate
C00245  Taurine
C00263  L-Homoserine
C00283  Hydrogen sulfide
C00320  Thiosulfate
C00409  Methanethiol
C00580  Dimethyl sulfide
C00979  O-Acetyl-L-serine
C01118  O-Succinyl-L-homoserine
C01861  Trithionate
C02084  Tetrathionate
C03920  2-(Methylthio)ethanesulfonate
C04022  S,S-Dimethyl-beta-propiothetin
C08276  3-(Methylthio)propanoate
C11142  Dimethyl sulfone
C11143  Dimethyl sulfoxide
C11145  Methanesulfonic acid
C15521  Alkanesulfonate
C17267  S-Sulfanylglutathione
C19692  Polysulfide
C20870  3-(Methylthio)propanoyl-CoA
C20955  3-(Methylthio)acryloyl-CoA
C22834  Protein-trisulfide
Reference
  Authors
Grein F, Ramos AR, Venceslau SS, Pereira IA
  Title
Unifying concepts in anaerobic respiration: Insights from dissimilatory sulfur metabolism.
  Journal
Biochim Biophys Acta 1827:145-60 (2013)
DOI:10.1016/j.bbabio.2012.09.001
Reference
  Authors
Fauque GD, Barton LL
  Title
Hemoproteins in dissimilatory sulfate- and sulfur-reducing prokaryotes.
  Journal
Adv Microb Physiol 60:1-90 (2012)
DOI:10.1016/B978-0-12-398264-3.00001-2
Reference
  Authors
Sakurai H, Ogawa T, Shiga M, Inoue K
  Title
Inorganic sulfur oxidizing system in green sulfur bacteria.
  Journal
Photosynth Res 104:163-76 (2010)
DOI:10.1007/s11120-010-9531-2
Reference
  Authors
Falkenby LG, Szymanska M, Holkenbrink C, Habicht KS, Andersen JS, Miller M, Frigaard NU
  Title
Quantitative proteomics of Chlorobaculum tepidum: insights into the sulfur metabolism of a phototrophic green sulfur bacterium.
  Journal
FEMS Microbiol Lett 323:142-50 (2011)
DOI:10.1111/j.1574-6968.2011.02370.x
Reference
  Authors
Gregersen LH, Bryant DA, Frigaard NU
  Title
Mechanisms and evolution of oxidative sulfur metabolism in green sulfur bacteria.
  Journal
Front Microbiol 2:116 (2011)
DOI:10.3389/fmicb.2011.00116
Reference
  Authors
Beller HR, Chain PS, Letain TE, Chakicherla A, Larimer FW, Richardson PM, Coleman MA, Wood AP, Kelly DP.
  Title
The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans.
  Journal
J Bacteriol 188:1473-88 (2006)
DOI:10.1128/JB.188.4.1473-1488.2006
Reference
PMID:9695921
  Authors
Pott AS, Dahl C
  Title
Sirohaem sulfite reductase and other proteins encoded by genes at the dsr locus of Chromatium vinosum are involved in the oxidation of intracellular sulfur.
  Journal
Microbiology 144 ( Pt 7):1881-94 (1998)
DOI:10.1099/00221287-144-7-1881
Reference
  Authors
Frigaard NU, Dahl C
  Title
Sulfur metabolism in phototrophic sulfur bacteria.
  Journal
Adv Microb Physiol 54:103-200 (2009)
DOI:10.1016/S0065-2911(08)00002-7
Related
pathway
azs00260  Glycine, serine and threonine metabolism
azs00270  Cysteine and methionine metabolism
azs00680  Methane metabolism
azs00720  Carbon fixation pathways in prokaryotes
KO pathway
ko00920   
LinkDB

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