PATHWAY: bard01100 Help Entry bard01100                   Pathway                                 Name Metabolic pathways - Bacillus arachidis Class BRITE hierarchy Pathway map bard01100   Metabolic pathways Module bard_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:bard01100] bard_M00002   Glycolysis, core module involving three-carbon compounds [PATH:bard01100] bard_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bard01100] bard_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:bard01100] bard_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:bard01100] bard_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:bard01100] bard_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:bard01100] bard_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:bard01100] bard_M00012   Glyoxylate cycle [PATH:bard01100] bard_M00015   Proline biosynthesis, glutamate => proline [PATH:bard01100] bard_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:bard01100] bard_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:bard01100] bard_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:bard01100] bard_M00021   Cysteine biosynthesis, serine => cysteine [PATH:bard01100] bard_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:bard01100] bard_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:bard01100] bard_M00026   Histidine biosynthesis, PRPP => histidine [PATH:bard01100] bard_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:bard01100] bard_M00034   Methionine salvage pathway [PATH:bard01100] bard_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:bard01100] bard_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:bard01100] bard_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:bard01100] bard_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:bard01100] bard_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:bard01100] bard_M00082   Fatty acid biosynthesis, initiation [PATH:bard01100] bard_M00083   Fatty acid biosynthesis, elongation [PATH:bard01100] bard_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:bard01100] bard_M00087   beta-Oxidation [PATH:bard01100] bard_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:bard01100] bard_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:bard01100] bard_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:bard01100] bard_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:bard01100] bard_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:bard01100] bard_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:bard01100] bard_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:bard01100] bard_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:bard01100] bard_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:bard01100] bard_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:bard01100] bard_M00135   GABA biosynthesis, eukaryotes, putrescine => GABA [PATH:bard01100] bard_M00140   C1-unit interconversion, prokaryotes [PATH:bard01100] bard_M00151   Cytochrome bc1 complex respiratory unit [PATH:bard01100] bard_M00155   Cytochrome c oxidase, prokaryotes [PATH:bard01100] bard_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:bard01100] bard_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bard01100] bard_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:bard01100] bard_M00416   Cytochrome aa3-600 menaquinol oxidase [PATH:bard01100] bard_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:bard01100] bard_M00525   Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine [PATH:bard01100] bard_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:bard01100] bard_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:bard01100] bard_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:bard01100] bard_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:bard01100] bard_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:bard01100] bard_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:bard01100] bard_M00609   Cysteine biosynthesis, methionine => cysteine [PATH:bard01100] bard_M00621   Glycine cleavage system [PATH:bard01100] bard_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:bard01100] bard_M00793   dTDP-L-rhamnose biosynthesis [PATH:bard01100] bard_M00844   Arginine biosynthesis, ornithine => arginine [PATH:bard01100] bard_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:bard01100] bard_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:bard01100] bard_M00876   Staphyloferrin A biosynthesis, L-ornithine => staphyloferrin A [PATH:bard01100] bard_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:bard01100] bard_M00883   Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:bard01100] bard_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:bard01100] bard_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:bard01100] bard_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:bard01100] bard_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:bard01100] bard_M00972   Proline metabolism [PATH:bard01100] Organism Bacillus arachidis [GN:bard] Related pathway bard00010   Glycolysis / Gluconeogenesis bard00020   Citrate cycle (TCA cycle) bard00030   Pentose phosphate pathway bard00040   Pentose and glucuronate interconversions bard00051   Fructose and mannose metabolism bard00052   Galactose metabolism bard00053   Ascorbate and aldarate metabolism bard00061   Fatty acid biosynthesis bard00071   Fatty acid degradation bard00130   Ubiquinone and other terpenoid-quinone biosynthesis bard00190   Oxidative phosphorylation bard00220   Arginine biosynthesis bard00230   Purine metabolism bard00240   Pyrimidine metabolism bard00250   Alanine, aspartate and glutamate metabolism bard00260   Glycine, serine and threonine metabolism bard00261   Monobactam biosynthesis bard00270   Cysteine and methionine metabolism bard00280   Valine, leucine and isoleucine degradation bard00290   Valine, leucine and isoleucine biosynthesis bard00300   Lysine biosynthesis bard00310   Lysine degradation bard00330   Arginine and proline metabolism bard00332   Carbapenem biosynthesis bard00340   Histidine metabolism bard00350   Tyrosine metabolism bard00360   Phenylalanine metabolism bard00361   Chlorocyclohexane and chlorobenzene degradation bard00362   Benzoate degradation bard00380   Tryptophan metabolism bard00400   Phenylalanine, tyrosine and tryptophan biosynthesis bard00401   Novobiocin biosynthesis bard00410   beta-Alanine metabolism bard00430   Taurine and hypotaurine metabolism bard00450   Selenocompound metabolism bard00460   Cyanoamino acid metabolism bard00470   D-Amino acid metabolism bard00480   Glutathione metabolism bard00500   Starch and sucrose metabolism bard00511   Other glycan degradation bard00520   Amino sugar and nucleotide sugar metabolism bard00521   Streptomycin biosynthesis bard00523   Polyketide sugar unit biosynthesis bard00525   Acarbose and validamycin biosynthesis bard00541   O-Antigen nucleotide sugar biosynthesis bard00542   O-Antigen repeat unit biosynthesis bard00543   Exopolysaccharide biosynthesis bard00550   Peptidoglycan biosynthesis bard00552   Teichoic acid biosynthesis bard00561   Glycerolipid metabolism bard00562   Inositol phosphate metabolism bard00564   Glycerophospholipid metabolism bard00592   alpha-Linolenic acid metabolism bard00600   Sphingolipid metabolism bard00620   Pyruvate metabolism bard00622   Xylene degradation bard00625   Chloroalkane and chloroalkene degradation bard00626   Naphthalene degradation bard00627   Aminobenzoate degradation bard00630   Glyoxylate and dicarboxylate metabolism bard00640   Propanoate metabolism bard00643   Styrene degradation bard00650   Butanoate metabolism bard00660   C5-Branched dibasic acid metabolism bard00670   One carbon pool by folate bard00680   Methane metabolism bard00730   Thiamine metabolism bard00740   Riboflavin metabolism bard00750   Vitamin B6 metabolism bard00760   Nicotinate and nicotinamide metabolism bard00770   Pantothenate and CoA biosynthesis bard00780   Biotin metabolism bard00785   Lipoic acid metabolism bard00790   Folate biosynthesis bard00860   Porphyrin metabolism bard00900   Terpenoid backbone biosynthesis bard00907   Pinene, camphor and geraniol degradation bard00910   Nitrogen metabolism bard00920   Sulfur metabolism bard00946   Degradation of flavonoids bard00997   Biosynthesis of various other secondary metabolites bard00998   Biosynthesis of various antibiotics bard00999   Biosynthesis of various plant secondary metabolites bard01040   Biosynthesis of unsaturated fatty acids bard01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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