KEGG   PATHWAY: bfx03430
Entry
bfx03430                    Pathway                                
Name
Mismatch repair - Priestia flexa
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
bfx03430  Mismatch repair
bfx03430

Other DBs
GO: 0006298
Organism
Priestia flexa [GN:bfx]
Gene
BC359_07245  DNA mismatch repair protein MutS [KO:K03555]
BC359_04055  endonuclease MutS2 [KO:K07456]
BC359_07250  DNA mismatch repair protein MutL [KO:K03572]
BC359_11230  helicase [KO:K03657] [EC:5.6.2.4]
BC359_16640  ATP-dependent DNA helicase Rep [KO:K03657] [EC:5.6.2.4]
BC359_19555  ATP-dependent DNA helicase PcrA [KO:K03657] [EC:5.6.2.4]
BC359_05450  exodeoxyribonuclease VII large subunit [KO:K03601] [EC:3.1.11.6]
BC359_05455  exodeoxyribonuclease VII small subunit [KO:K03602] [EC:3.1.11.6]
BC359_01070  single-stranded DNA-binding protein [KO:K03111]
BC359_02060  single-stranded DNA-binding protein [KO:K03111]
BC359_03840  DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
BC359_00980  DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
BC359_00865  DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
BC359_04835  DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
BC359_00735  DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
BC359_11445  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
BC359_19550  ligA; DNA ligase (NAD(+)) LigA [KO:K01972] [EC:6.5.1.2]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   
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