KEGG   PATHWAY: cpep04814
Entry
cpep04814                   Pathway                                
Name
Motor proteins - Cucurbita pepo subsp. pepo (vegetable marrow)
Class
Cellular Processes; Cell motility
Pathway map
cpep04814  Motor proteins
cpep04814

Organism
Cucurbita pepo subsp. pepo (vegetable marrow) [GN:cpep]
Gene
111778247  dynein light chain 1, cytoplasmic-like [KO:K10418]
111778400  dynein light chain LC6, flagellar outer arm-like [KO:K10418]
111789211  dynein light chain 2, cytoplasmic-like [KO:K10418]
111792286  dynein light chain 1, cytoplasmic-like [KO:K10418]
111796659  dynein light chain LC6, flagellar outer arm [KO:K10418]
111791776  dynein light chain 1, cytoplasmic-like [KO:K10418]
111799787  dynein light chain 1, cytoplasmic-like [KO:K10418]
111806499  dynein light chain 1, cytoplasmic-like [KO:K10418]
111789982  dynein light chain 1, cytoplasmic-like [KO:K10418]
111806907  dynein light chain 1, cytoplasmic-like isoform X1 [KO:K10418]
111794668  dynein light chain 1, cytoplasmic-like isoform X1 [KO:K10418]
111800549  dynein light chain-like [KO:K10418]
111809340  dynein light chain LC6, flagellar outer arm [KO:K10418]
111799067  uncharacterized protein LOC111799067 [KO:K10418]
111798869  F-actin-capping protein subunit alpha-like [KO:K10364]
111804752  F-actin-capping protein subunit alpha-like [KO:K10364]
111808159  probable F-actin-capping protein subunit beta isoform X1 [KO:K10365]
111777377  tubulin alpha-3 chain [KO:K07374]
111781669  tubulin alpha chain isoform X1 [KO:K07374]
111793030  tubulin alpha-4 chain [KO:K07374]
111809983  tubulin alpha chain-like [KO:K07374]
111794469  tubulin alpha chain-like [KO:K07374]
111811277  tubulin alpha chain-like [KO:K07374]
111803282  tubulin alpha chain-like [KO:K07374]
111789643  tubulin alpha-3 chain-like [KO:K07374]
111800289  tubulin alpha-3 chain-like [KO:K07374]
111782489  tubulin beta chain-like [KO:K07375]
111786760  tubulin beta chain-like [KO:K07375]
111783042  tubulin beta chain-like [KO:K07375]
111781834  tubulin beta-1 chain [KO:K07375]
111780343  tubulin beta-6 chain [KO:K07375]
111795490  tubulin beta chain-like [KO:K07375]
111803211  tubulin beta chain-like [KO:K07375]
111805384  tubulin beta chain-like [KO:K07375]
111801771  tubulin beta chain [KO:K07375]
111798781  tubulin beta chain-like [KO:K07375]
111790517  tubulin beta chain-like [KO:K07375]
111800514  tubulin beta chain-like [KO:K07375]
111793764  tubulin beta-6 chain-like [KO:K07375]
111791151  tubulin gamma-2 chain [KO:K10389]
111808876  kinesin-like protein KIN-UC [KO:K10396]
111801286  kinesin-like protein KIN-UC isoform X1 [KO:K10396]
111794916  kinesin-like protein KIN-UA isoform X1 [KO:K10396]
111790956  kinesin-like protein KIN-UB isoform X1 [KO:K10396]
111800961  kinesin-like protein KIN-UB [KO:K10396]
111778586  kinesin-like protein KIN-10A [KO:K10398]
111786706  kinesin-like protein KIN-5D [KO:K10398]
111782952  kinesin-like protein KIN-5D [KO:K10398]
111801080  kinesin-like protein KIN-5C [KO:K10398]
111803151  kinesin-like protein KIN-5B [KO:K10398]
111806518  kinesin-like protein KIN-10A [KO:K10398]
111789891  kinesin-like protein KIN-5C isoform X1 [KO:K10398]
111781374  kinesin-like protein KIN-7K, chloroplastic [KO:K11498]
111783300  kinesin-like protein NACK1 [KO:K11498]
111777396  LOW QUALITY PROTEIN: kinesin-like protein KIN-7D, mitochondrial [KO:K11498]
111805118  kinesin-like protein KIN-7G [KO:K11498]
111811113  kinesin-like protein KIN-7E [KO:K11498]
111803440  kinesin-like protein KIN-7K, chloroplastic [KO:K11498]
111792969  kinesin-like protein KIN-7E [KO:K11498]
111810033  kinesin-like protein KIN-7E [KO:K11498]
111790936  kinesin-like protein KIN-7O [KO:K11498]
111793124  kinesin-like protein KIN-7D, mitochondrial isoform X1 [KO:K11498]
111795325  kinesin-like protein KIN-7D, mitochondrial isoform X1 [KO:K11498]
111801397  kinesin-like protein NACK1 isoform X1 [KO:K11498]
111801399  kinesin-like protein KIN-7E [KO:K11498]
111798204  kinesin-like protein KIN-7N [KO:K11498]
111808012  kinesin-like protein KIN-7C, mitochondrial [KO:K11498]
111798274  kinesin-like protein KIN-7E isoform X1 [KO:K11498]
111811571  kinesin-like protein KIN-7D, mitochondrial [KO:K11498]
111792829  kinesin-like protein NACK2 [KO:K11498]
111779734  kinesin-like protein KIN-8A [KO:K26157]
111793239  kinesin-like protein KIN-8A [KO:K26157]
111781571  kinesin-like protein KIN-8B isoform X1 [KO:K26157]
111791164  kinesin-like protein KIN-10B [KO:K10403]
111808181  kinesin-like protein KIN-10C isoform X1 [KO:K10403]
111800791  kinesin-like protein KIN-12F [KO:K10400]
111810754  kinesin-like protein KIN-12F isoform X1 [KO:K10400]
111795614  kinesin-like protein KIN-12D [KO:K10400]
111801198  kinesin-like protein KIN-12B [KO:K10400]
111791432  kinesin-like protein KIN-12B isoform X1 [KO:K10400]
111793720  kinesin-like protein KIN-12E [KO:K10400]
111806594  kinesin-like protein KIN-12C isoform X1 [KO:K10400]
111779035  kinesin-like protein KIN-13A [KO:K10393]
111779152  kinesin-like protein KIN-13B [KO:K10393]
111780330  kinesin-like protein KIN-13B [KO:K10393]
111806462  kinesin-like protein KIN-13A isoform X1 [KO:K10393]
111806913  kinesin-like protein KIN-13B [KO:K10393]
111793224  kinesin-like protein KIN-13B isoform X1 [KO:K10393]
111782971  kinesin-like protein KIN-14C [KO:K10405]
111802448  kinesin-like protein KIN-14C [KO:K10405]
111789229  kinesin-like protein KIN-14N isoform X1 [KO:K10405]
111796601  kinesin-like protein KIN-14N [KO:K10405]
111787721  kinesin-like protein KIN-14F [KO:K10406]
111778642  kinesin-like protein KIN-14Q isoform X1 [KO:K10406]
111786061  kinesin-like protein KIN-14S isoform X1 [KO:K10406]
111780421  LOW QUALITY PROTEIN: kinesin-like protein KIN-14G [KO:K10406]
111799857  kinesin-like protein KIN-14P [KO:K10406]
111809787  kinesin-like protein KIN-14Q isoform X1 [KO:K10406]
111798137  kinesin-like protein KIN-14L isoform X1 [KO:K10406]
111808167  kinesin-like protein KIN-14J isoform X1 [KO:K10406]
111789255  kinesin-like protein KIN-14I [KO:K10406]
111791419  kinesin-like protein KIN-14I isoform X1 [KO:K10406]
111804984  kinesin-like protein KIN-14S [KO:K10406]
111791535  LOW QUALITY PROTEIN: kinesin-like protein KIN-14P [KO:K10406]
111792732  kinesin-like protein KIN-14I isoform X1 [KO:K10406]
111795919  kinesin-like protein KIN-14J [KO:K10406]
111798336  kinesin-like protein KIN-14S isoform X1 [KO:K10406]
111797147  kinesin-like protein KIN-14F [KO:K10406]
111780287  myosin-17-like [KO:K10357]
111778431  myosin-12-like isoform X1 [KO:K10357]
111778121  myosin-6-like [KO:K10357]
111788698  myosin-2-like [KO:K10357]
111804849  myosin-11-like isoform X1 [KO:K10357]
111792608  myosin-17-like [KO:K10357]
111806002  myosin-15 [KO:K10357]
111796588  myosin-2-like [KO:K10357]
111807183  myosin-11-like [KO:K10357]
111807572  myosin-12 isoform X1 [KO:K10357]
111806791  myosin-6-like [KO:K10357]
111808417  myosin-9 isoform X1 [KO:K10357]
111800250  myosin-7-like isoform X1 [KO:K10357]
111798068  myosin-11 isoform X1 [KO:K10357]
111777130  actin-7 [KO:K10355]
111777580  actin-97-like [KO:K10355]
111803633  actin-like [KO:K10355]
111811600  actin-7-like [KO:K10355]
111776830  actin-97-like [KO:K10355]
111779268  actin-1-like [KO:K10355]
111781300  actin-7 [KO:K10355]
111782262  actin-like [KO:K10355]
111787537  actin [KO:K10355]
111790314  actin-like [KO:K10355]
111792146  actin-7-like [KO:K10355]
111794348  actin-7-like [KO:K10355]
111794457  actin [KO:K10355]
111803495  actin-7 [KO:K10355]
111804946  actin-97-like [KO:K10355]
111809201  actin-1 [KO:K10355]
111776998  peroxisomal and mitochondrial division factor 2-like [KO:K10374]
Reference
  Authors
Hirokawa N, Niwa S, Tanaka Y
  Title
Molecular motors in neurons: transport mechanisms and roles in brain function, development, and disease.
  Journal
Neuron 68:610-38 (2010)
DOI:10.1016/j.neuron.2010.09.039
Reference
PMID:25470043 (PDB:4RH7)
  Authors
Schmidt H, Zalyte R, Urnavicius L, Carter AP
  Title
Structure of human cytoplasmic dynein-2 primed for its power stroke.
  Journal
Nature 518:435-438 (2015)
DOI:10.1038/nature14023
Reference
PMID:22398446 (PDB:3VKG 3VKH)
  Authors
Kon T, Oyama T, Shimo-Kon R, Imamula K, Shima T, Sutoh K, Kurisu G
  Title
The 2.8 A crystal structure of the dynein motor domain.
  Journal
Nature 484:345-50 (2012)
DOI:10.1038/nature10955
Reference
PMID:22997337 (PDB:3J1T 3J1U)
  Authors
Redwine WB, Hernandez-Lopez R, Zou S, Huang J, Reck-Peterson SL, Leschziner AE
  Title
Structural basis for microtubule binding and release by dynein.
  Journal
Science 337:1532-1536 (2012)
DOI:10.1126/science.1224151
Reference
  Authors
Gibbs KL, Greensmith L, Schiavo G
  Title
Regulation of Axonal Transport by Protein Kinases.
  Journal
Trends Biochem Sci 40:597-610 (2015)
DOI:10.1016/j.tibs.2015.08.003
Reference
PMID:28602352 (PDB:5NUG 5NVS 5NVU 5NW4)
  Authors
Zhang K, Foster HE, Rondelet A, Lacey SE, Bahi-Buisson N, Bird AW, Carter AP
  Title
Cryo-EM Reveals How Human Cytoplasmic Dynein Is Auto-inhibited and Activated.
  Journal
Cell 169:1303-1314.e18 (2017)
DOI:10.1016/j.cell.2017.05.025
Reference
PMID:25814576 (PDB:5ADX 5AFR 5AFU)
  Authors
Urnavicius L, Zhang K, Diamant AG, Motz C, Schlager MA, Yu M, Patel NA, Robinson CV, Carter AP
  Title
The structure of the dynactin complex and its interaction with dynein.
  Journal
Science 347:1441-1446 (2015)
DOI:10.1126/science.aaa4080
Reference
PMID:29420470 (PDB:5OWO 6F1T 6F1U 6F1V 6F1Y 6F1Z 6F38 6F3A)
  Authors
Urnavicius L, Lau CK, Elshenawy MM, Morales-Rios E, Motz C, Yildiz A, Carter AP
  Title
Cryo-EM shows how dynactin recruits two dyneins for faster movement.
  Journal
Nature 554:202-206 (2018)
DOI:10.1038/nature25462
Reference
  Authors
Reck-Peterson SL, Redwine WB, Vale RD, Carter AP
  Title
The cytoplasmic dynein transport machinery and its many cargoes.
  Journal
Nat Rev Mol Cell Biol 19:382-398 (2018)
DOI:10.1038/s41580-018-0004-3
Reference
PMID:23434508 (PDB:3J2U)
  Authors
Asenjo AB, Chatterjee C, Tan D, DePaoli V, Rice WJ, Diaz-Avalos R, Silvestry M, Sosa H
  Title
Structural model for tubulin recognition and deformation by kinesin-13 microtubule depolymerases.
  Journal
Cell Rep 3:759-68 (2013)
DOI:10.1016/j.celrep.2013.01.030
Reference
PMID:10338210 (PDB:1B7T)
  Authors
Houdusse A, Kalabokis VN, Himmel D, Szent-Gyorgyi AG, Cohen C
  Title
Atomic structure of scallop myosin subfragment S1 complexed with MgADP: a novel conformation of the myosin head.
  Journal
Cell 97:459-70 (1999)
DOI:10.1016/s0092-8674(00)80756-4
Reference
PMID:9428521 (PDB:3KIN)
  Authors
Kozielski F, Sack S, Marx A, Thormahlen M, Schonbrunn E, Biou V, Thompson A, Mandelkow EM, Mandelkow E
  Title
The crystal structure of dimeric kinesin and implications for microtubule-dependent motility.
  Journal
Cell 91:985-94 (1997)
DOI:10.1016/s0092-8674(00)80489-4
Reference
PMID:8316857 (PDB:2MYS)
  Authors
Rayment I, Rypniewski WR, Schmidt-Base K, Smith R, Tomchick DR, Benning MM, Winkelmann DA, Wesenberg G, Holden HM
  Title
Three-dimensional structure of myosin subfragment-1: a molecular motor.
  Journal
Science 261:50-8 (1993)
DOI:10.1126/science.8316857
Reference
  Authors
Parker D, Bryant Z, Delp SL
  Title
Coarse-Grained Structural Modeling of Molecular Motors Using Multibody Dynamics.
  Journal
Cell Mol Bioeng 2:366-374 (2009)
DOI:10.1007/s12195-009-0084-4
Reference
  Authors
Dominguez R, Holmes KC
  Title
Actin structure and function.
  Journal
Annu Rev Biophys 40:169-86 (2011)
DOI:10.1146/annurev-biophys-042910-155359
Reference
PMID:31919429 (PDB:6KN7 6KN8)
  Authors
Yamada Y, Namba K, Fujii T
  Title
Cardiac muscle thin filament structures reveal calcium regulatory mechanism.
  Journal
Nat Commun 11:153 (2020)
DOI:10.1038/s41467-019-14008-1
Reference
  Authors
Kruppa AJ, Buss F
  Title
Motor proteins at the mitochondria-cytoskeleton interface.
  Journal
J Cell Sci 134:239092 (2021)
DOI:10.1242/jcs.226084
KO pathway
ko04814   
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