KEGG   PATHWAY: csin00195
Entry
csin00195                   Pathway                                
Name
Photosynthesis - Camellia sinensis (tea plant)
Description
Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.
Class
Metabolism; Energy metabolism
Pathway map
csin00195  Photosynthesis
csin00195

Module
csin_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:csin00195]
csin_M00161  Photosystem II [PATH:csin00195]
csin_M00163  Photosystem I [PATH:csin00195]
Organism
Camellia sinensis (tea plant) [GN:csin]
Gene
14412515  psbA; photosystem II protein D1 [KO:K02703] [EC:1.10.3.9]
14412451  psbB; photosystem II 47 kDa protein [KO:K02704]
114308349  uncharacterized protein LOC114308349 [KO:K02704]
114315741  uncharacterized protein LOC114315741 [KO:K02704]
114319075  uncharacterized protein LOC114319075 [KO:K02704]
114319249  uncharacterized protein LOC114319249 [KO:K02704]
114296338  uncharacterized protein LOC114296338 [KO:K02704]
14412410  psbC; photosystem II 44 kDa protein [KO:K02705]
114296337  uncharacterized protein LOC114296337 [KO:K02705]
114274889  uncharacterized protein LOC114274889 [KO:K02705]
14412409  psbD; photosystem II protein D2 [KO:K02706] [EC:1.10.3.9]
114312078  uncharacterized protein LOC114312078 [KO:K02706] [EC:1.10.3.9]
114256778  uncharacterized protein LOC114256778 [KO:K02706] [EC:1.10.3.9]
14412440  psbE; photosystem II protein V [KO:K02707]
14412439  psbF; photosystem II protein VI [KO:K02708]
14412454  psbH; photosystem II protein H [KO:K02709]
14412390  psbI; photosystem II protein I [KO:K02710]
14412437  psbJ; photosystem II protein J [KO:K02711]
14412389  psbK; photosystem II protein K [KO:K02712]
14412438  psbL; photosystem II protein L [KO:K02713]
14412404  psbM; PSII M protein [KO:K02714]
114283247  oxygen-evolving enhancer protein 1, chloroplastic [KO:K02716]
114262358  oxygen-evolving enhancer protein 1, chloroplastic-like [KO:K02716]
114262920  psbP-like protein 1, chloroplastic isoform X1 [KO:K02717]
114263390  oxygen-evolving enhancer protein 2, chloroplastic [KO:K02717]
114322167  photosynthetic NDH subunit of lumenal location 2, chloroplastic [KO:K08901]
114302753  photosynthetic NDH subunit of lumenal location 2, chloroplastic-like [KO:K08901]
114293455  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
114297129  photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [KO:K08901]
114297903  oxygen-evolving enhancer protein 3, chloroplastic-like [KO:K08901]
114309590  photosystem II 10 kDa polypeptide, chloroplastic-like isoform X1 [KO:K03541]
114282721  photosystem II 10 kDa polypeptide, chloroplastic-like [KO:K03541]
114267897  photosystem II 22 kDa protein, chloroplastic [KO:K03542]
114292486  photosystem II 22 kDa protein, chloroplastic-like [KO:K03542]
114300372  photosystem II 22 kDa protein, chloroplastic-like isoform X1 [KO:K03542]
14412452  psbT; photosystem II protein T [KO:K02718]
114322719  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
114278385  photosystem II reaction center W protein, chloroplastic-like [KO:K02721]
114324137  photosystem II core complex proteins psbY, chloroplastic-like [KO:K02723]
114264903  photosystem II core complex proteins psbY, chloroplastic-like [KO:K02723]
14412412  psbZ; photosystem II protein Z [KO:K02724]
114307235  photosystem II repair protein PSB27-H1, chloroplastic [KO:K08902]
114317535  photosystem II reaction center PSB28 protein, chloroplastic [KO:K08903]
14412417  psaA; photosystem I P700 chlorophyll a apoprotein A1 [KO:K02689] [EC:1.97.1.12]
14412416  psaB; photosystem I P700 chlorophyll a apoprotein A2 [KO:K02690] [EC:1.97.1.12]
14412490  psaC; photosystem I subunit VII [KO:K02691] [EC:1.97.1.12]
114287061  photosystem I reaction center subunit II, chloroplastic-like [KO:K02692]
114317689  photosystem I reaction center subunit IV B, chloroplastic-like [KO:K02693]
114258305  photosystem I reaction center subunit IV B, chloroplastic-like [KO:K02693]
114265862  photosystem I reaction center subunit III, chloroplastic [KO:K02694]
114256852  photosystem I reaction center subunit V, chloroplastic [KO:K08905]
114323920  photosystem I reaction center subunit VI, chloroplastic-like [KO:K02695]
114259090  photosystem I reaction center subunit VI, chloroplastic-like [KO:K02695]
14412433  psaI; PSI reaction center subunit VIII [KO:K02696]
14412445  psaJ; PSI reaction centre subunit IX [KO:K02697]
114297103  photosystem I reaction center subunit psaK, chloroplastic [KO:K02698]
114272572  photosystem I reaction center subunit XI, chloroplastic-like [KO:K02699]
114257567  photosystem I reaction center subunit XI, chloroplastic-like [KO:K02699]
114292216  photosystem I reaction center subunit N, chloroplastic [KO:K02701]
114287608  photosystem I subunit O [KO:K14332]
14412436  petA; cytochrome f [KO:K02634]
114310130  uncharacterized protein LOC114310130 [KO:K02634]
14412455  petB; cytochrome b6 [KO:K02635]
114288646  cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic isoform X1 [KO:K02636] [EC:7.1.1.6]
14412456  petD; cytochrome b6/f complex subunit IV [KO:K02637]
14412442  petG; cytochrome b6/f complex subunit V [KO:K02640]
14412403  petN; cytochrome b6/f complex subunit VIII [KO:K03689]
114260195  plastocyanin [KO:K02638]
114320676  ferredoxin [KO:K02639]
114322664  ferredoxin, root R-B1-like [KO:K02639]
114308521  ferredoxin C 2, chloroplastic-like [KO:K02639]
114319149  ferredoxin, root R-B1-like [KO:K02639]
114303992  LOW QUALITY PROTEIN: ferredoxin C 1, chloroplastic [KO:K02639]
114284782  ferredoxin C 2, chloroplastic-like isoform X1 [KO:K02639]
114287330  ferredoxin-like [KO:K02639]
114269295  ferredoxin, root R-B2-like [KO:K02639]
114273447  ferredoxin, root R-B1-like [KO:K02639]
114316202  ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic [KO:K02641] [EC:1.18.1.2]
114289782  ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic-like [KO:K02641] [EC:1.18.1.2]
114296294  ferredoxin--NADP reductase, root isozyme, chloroplastic-like [KO:K02641] [EC:1.18.1.2]
114265889  cytochrome c6, chloroplastic isoform X1 [KO:K08906]
14412429  atpE; ATP synthase CF1 epsilon subunit [KO:K02114]
14412430  atpB; ATP synthase CF1 beta subunit [KO:K02112] [EC:7.1.2.2 7.2.2.1]
114305725  uncharacterized protein LOC114305725 [KO:K02112] [EC:7.1.2.2 7.2.2.1]
114274877  ATP synthase gamma chain, chloroplastic-like [KO:K02115]
114276123  ATP synthase gamma chain, chloroplastic-like [KO:K02115]
114259061  ATP synthase gamma chain, chloroplastic [KO:K02115]
14412394  atpA; ATP synthase CF1 alpha subunit [KO:K02111] [EC:7.1.2.2 7.2.2.1]
114294458  ATP synthase subunit alpha, chloroplastic-like [KO:K02111] [EC:7.1.2.2 7.2.2.1]
114324088  ATP synthase delta chain, chloroplastic [KO:K02113]
14412395  atpF; ATP synthase CF0 B subunit [KO:K02109]
114307590  ATP synthase subunit b', chloroplastic [KO:K02109]
14412396  atpH; ATP synthase CF0 C subunit [KO:K02110]
14412397  atpI; ATP synthase CF0 A subunit [KO:K02108]
Compound
C00001  H2O
C00002  ATP
C00005  NADPH
C00006  NADP+
C00007  Oxygen
C00008  ADP
C00009  Orthophosphate
C00034  Manganese
C00080  H+
C02061  Plastoquinone
C16693  Plastoquinol
Reference
PMID:14764885
  Authors
Ferreira KN, Iverson TM, Maghlaoui K, Barber J, Iwata S.
  Title
Architecture of the photosynthetic oxygen-evolving center.
  Journal
Science 303:1831-8 (2004)
DOI:10.1126/science.1093087
Reference
PMID:12518057
  Authors
Kamiya N, Shen JR.
  Title
Crystal structure of oxygen-evolving photosystem II from Thermosynechococcus vulcanus at 3.7-A resolution.
  Journal
Proc Natl Acad Sci U S A 100:98-103 (2003)
DOI:10.1073/pnas.0135651100
Reference
PMID:11217865
  Authors
Zouni A, Witt HT, Kern J, Fromme P, Krauss N, Saenger W, Orth P.
  Title
Crystal structure of photosystem II from Synechococcus elongatus at 3.8 A resolution.
  Journal
Nature 409:739-743 (2001)
DOI:10.1038/35055589
Reference
PMID:11418848
  Authors
Jordan P, Fromme P, Witt HT, Klukas O, Saenger W, Krauss N.
  Title
Three-dimensional structure of cyanobacterial photosystem I at 2.5 A resolution.
  Journal
Nature 411:909-917 (2001)
DOI:10.1038/35082000
Reference
PMID:11369223
  Authors
Jones MR, Fyfe PK.
  Title
Photosynthesis: new light on biological oxygen production.
  Journal
Curr Biol 17:R318-R321 (2001)
DOI:10.1016/S0960-9822(01)00174-9
Reference
PMID:11914373
  Authors
Shen G, Zhao J, Reimer SK, Antonkine ML, Cai Q, Weiland SM, Golbeck JH, Bryant DA.
  Title
Assembly of photosystem I. I. Inactivation of the rubA gene encoding a membrane-associated rubredoxin in the cyanobacterium Synechococcus sp. PCC 7002 causes a loss of photosystem I activity.
  Journal
J Biol Chem 277:20343-54 (2002)
DOI:10.1074/jbc.M201103200
Related
pathway
csin00196  Photosynthesis - antenna proteins
csin00710  Carbon fixation by Calvin cycle
KO pathway
ko00195   
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