KEGG   PATHWAY: ctec03430
Entry
ctec03430                   Pathway                                
Name
Mismatch repair - Chlamydia trachomatis E/C599
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
ctec03430  Mismatch repair
ctec03430

Other DBs
GO: 0006298
Organism
Chlamydia trachomatis E/C599 [GN:ctec]
Gene
EC599_8321  mutS; DNA mismatch repair protein [KO:K03555]
EC599_5961  mutL; DNA mismatch repair protein [KO:K03572]
EC599_6301  uvrD; DNA helicase [KO:K03657] [EC:5.6.2.4]
EC599_3371  xseA; exodeoxyribonuclease VII large subunit [KO:K03601] [EC:3.1.11.6]
EC599_3381  xseB; exodeoxyribonuclease VII small subunit [KO:K03602] [EC:3.1.11.6]
EC599_4621  recJ; single-stranded-DNA-specific exonuclease [KO:K07462] [EC:3.1.-.-]
EC599_0461  ssb; single-strand DNA binding protein [KO:K03111]
EC599_5661  dnaE; DNA polymerase III alpha subunit [KO:K02337] [EC:2.7.7.7]
EC599_0781  dnaN; DNA polymerase III, beta chain [KO:K02338] [EC:2.7.7.7]
EC599_1891  dnaX; DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
EC599_3431  dnaX_1; DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
EC599_0491  conserved hypothetical protein [KO:K02340] [EC:2.7.7.7]
EC599_5571  dnaQ2; DNA polymerase III, epsilon chain [KO:K02342] [EC:2.7.7.7]
EC599_2671  dnaQ; DNA polymerase III, epsilon chain [KO:K02342] [EC:2.7.7.7]
EC599_1511  dnlJ; NAD-dependent DNA ligase [KO:K01972] [EC:6.5.1.2]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   
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