KEGG   PATHWAY: eee03022
Entry
eee03022                    Pathway                                
Name
Basal transcription factors - Electrophorus electricus (electric eel)
Class
Genetic Information Processing; Transcription
Pathway map
eee03022  Basal transcription factors
eee03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Electrophorus electricus (electric eel) [GN:eee]
Gene
113571704  gtf2a1; transcription initiation factor IIA subunit 1 isoform X1 [KO:K03122]
113591107  gtf2a1l; TFIIA-alpha and beta-like factor [KO:K03122]
113567564  gtf2a2; transcription initiation factor IIA subunit 2 [KO:K03123]
113588237  gtf2b; transcription initiation factor IIB isoform X1 [KO:K03124]
113582045  tbp; TATA-box-binding protein [KO:K03120]
113579346  tbpl2; TATA box-binding protein-like protein 2 [KO:K03120]
113591529  tbpl1; TATA box-binding protein-like protein 1 [KO:K03120]
113592136  transcription initiation factor TFIID subunit 1-like [KO:K03125] [EC:2.3.1.48 2.7.11.1]
113578465  taf2; transcription initiation factor TFIID subunit 2 isoform X1 [KO:K03128]
113580365  taf7; transcription initiation factor TFIID subunit 7 [KO:K03132]
113576400  taf8; transcription initiation factor TFIID subunit 8 [KO:K14649]
113587892  taf3; LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 3 [KO:K14650]
113581074  taf10; transcription initiation factor TFIID subunit 10 [KO:K03134]
113574600  taf5; transcription initiation factor TFIID subunit 5 [KO:K03130]
113579649  LOW QUALITY PROTEIN: TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L [KO:K03130]
113585673  transcription initiation factor TFIID subunit 4-like [KO:K03129]
113586776  transcription initiation factor TFIID subunit 4-like [KO:K03129]
113579736  transcription initiation factor TFIID subunit 4-like isoform X1 [KO:K03129]
113589300  transcription initiation factor TFIID subunit 4-like [KO:K03129]
113584288  LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4-like [KO:K03129]
113572210  taf12; transcription initiation factor TFIID subunit 12 [KO:K03126]
113573714  taf6; transcription initiation factor TFIID subunit 6 [KO:K03131]
113581839  taf6l; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L isoform X1 [KO:K03131]
113571278  transcription initiation factor TFIID subunit 9-like [KO:K14535]
113587799  taf11; transcription initiation factor TFIID subunit 11 [KO:K03135]
113569965  taf13; transcription initiation factor TFIID subunit 13 [KO:K03127]
113592244  gtf2e1; general transcription factor IIE subunit 1 [KO:K03136]
113587701  gtf2e2; transcription initiation factor IIE subunit beta [KO:K03137]
113586746  gtf2f1; general transcription factor IIF subunit 1 [KO:K03138]
113577105  general transcription factor IIF subunit 2-like [KO:K03139] [EC:5.6.2.-]
113577115  gtf2f2; general transcription factor IIF subunit 2 isoform X1 [KO:K03139] [EC:5.6.2.-]
113583560  gtf2h1; general transcription factor IIH subunit 1 [KO:K03141]
113583510  gtf2h2c; general transcription factor IIH subunit 2-like protein [KO:K03142]
113576917  gtf2h3; general transcription factor IIH subunit 3 isoform X1 [KO:K03143]
113583415  gtf2h4; general transcription factor IIH subunit 4 [KO:K03144]
113569258  general transcription factor IIH subunit 4-like [KO:K03144]
113584098  ercc3; general transcription and DNA repair factor IIH helicase subunit XPB [KO:K10843] [EC:5.6.2.4]
113569696  ercc2; general transcription and DNA repair factor IIH helicase subunit XPD [KO:K10844] [EC:5.6.2.3]
113570586  gtf2h5; general transcription factor IIH subunit 5 [KO:K10845]
113574991  cdk7; cyclin-dependent kinase 7 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
113576236  mnat1; CDK-activating kinase assembly factor MAT1 isoform X1 [KO:K10842]
113572896  ccnh; cyclin-H isoform X1 [KO:K06634]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
eee03020  RNA polymerase
eee03420  Nucleotide excision repair
KO pathway
ko03022   
LinkDB

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