KEGG   PATHWAY: eee03050
Entry
eee03050                    Pathway                                
Name
Proteasome - Electrophorus electricus (electric eel)
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
eee03050  Proteasome
eee03050

Other DBs
GO: 0000502
Organism
Electrophorus electricus (electric eel) [GN:eee]
Gene
113581138  psmd3; 26S proteasome non-ATPase regulatory subunit 3 [KO:K03033]
113576942  psmd9; 26S proteasome non-ATPase regulatory subunit 9 [KO:K06693]
113590832  psmd12; 26S proteasome non-ATPase regulatory subunit 12 [KO:K03035]
113589639  26S proteasome non-ATPase regulatory subunit 11B [KO:K03036]
113588778  26S proteasome non-ATPase regulatory subunit 11A [KO:K03036]
113587326  psmd6; 26S proteasome non-ATPase regulatory subunit 6 [KO:K03037]
113579007  psmd7; 26S proteasome non-ATPase regulatory subunit 7 [KO:K03038]
113578388  26S proteasome non-ATPase regulatory subunit 13-like [KO:K03039]
113567554  26S proteasome non-ATPase regulatory subunit 13-like [KO:K03039]
113582536  psmd14; 26S proteasome non-ATPase regulatory subunit 14 [KO:K03030]
113585897  psmd8; 26S proteasome non-ATPase regulatory subunit 8 [KO:K03031]
113578660  sem1; 26S proteasome complex subunit SEM1 [KO:K10881]
113578355  psmd4; 26S proteasome non-ATPase regulatory subunit 4 [KO:K03029]
113580387  psmd2; 26S proteasome non-ATPase regulatory subunit 2 [KO:K03028]
113585740  psmd1; 26S proteasome non-ATPase regulatory subunit 1 [KO:K03032]
113581970  proteasomal ubiquitin receptor ADRM1-like [KO:K06691]
113576362  adrm1; LOW QUALITY PROTEIN: proteasomal ubiquitin receptor ADRM1 [KO:K06691]
113587775  psmc2; 26S proteasome regulatory subunit 7 [KO:K03061]
113571724  26S proteasome regulatory subunit 4 [KO:K03062]
113571385  26S proteasome regulatory subunit 4-like [KO:K03062]
113576881  psmc5; 26S proteasome regulatory subunit 8 [KO:K03066]
113571693  psmc6; 26S proteasome regulatory subunit 10B [KO:K03064]
113588917  psmc3; 26S proteasome regulatory subunit 6A [KO:K03065]
113574455  psmc4; 26S proteasome regulatory subunit 6B isoform X1 [KO:K03063]
113573350  psme1; proteasome activator complex subunit 1 isoform X1 [KO:K06696]
113591444  psme2; proteasome activator complex subunit 2 [KO:K06697]
113574844  psme3; proteasome activator complex subunit 3 [KO:K06698]
113577646  proteasome activator complex subunit 4B isoform X1 [KO:K06699]
113579958  psme4; proteasome activator complex subunit 4 isoform X1 [KO:K06699]
113585437  proteasome subunit alpha type-6-like [KO:K02730] [EC:3.4.25.1]
113571685  proteasome subunit alpha type-6-like [KO:K02730] [EC:3.4.25.1]
113571127  psma6; proteasome subunit alpha type-6 [KO:K02730] [EC:3.4.25.1]
113577072  psma2; proteasome subunit alpha type-2 [KO:K02726] [EC:3.4.25.1]
113571766  LOW QUALITY PROTEIN: proteasome subunit alpha type-2-like [KO:K02726] [EC:3.4.25.1]
113572016  psma4; proteasome subunit alpha type-4 [KO:K02728] [EC:3.4.25.1]
113586778  proteasome subunit alpha type-7 [KO:K02731] [EC:3.4.25.1]
113578921  psma5; proteasome subunit alpha type-5 [KO:K02729] [EC:3.4.25.1]
113588766  psma1; proteasome subunit alpha type-1 [KO:K02725] [EC:3.4.25.1]
113578566  psma3; proteasome subunit alpha type-3 [KO:K02727] [EC:3.4.25.1]
113581261  proteasome subunit beta type-6-B like protein [KO:K02738] [EC:3.4.25.1]
113592042  proteasome subunit beta type-6-like [KO:K02738] [EC:3.4.25.1]
113591075  proteasome subunit beta type-6-like [KO:K02738] [EC:3.4.25.1]
113581260  proteasome subunit beta type-7-like [KO:K02739] [EC:3.4.25.1]
113581598  psmb7; proteasome subunit beta type-7 [KO:K02739] [EC:3.4.25.1]
113583840  proteasome subunit beta type-7-like [KO:K02739] [EC:3.4.25.1]
113574041  psmb3; proteasome subunit beta type-3 [KO:K02735] [EC:3.4.25.1]
113584970  psmb2; proteasome subunit beta type-2 [KO:K02734] [EC:3.4.25.1]
113589194  proteasome subunit beta type-5-like [KO:K02737] [EC:3.4.25.1]
113586004  psmb1; proteasome subunit beta type-1 [KO:K02732] [EC:3.4.25.1]
113587452  psmb4; proteasome subunit beta type-4 [KO:K02736] [EC:3.4.25.1]
113581273  proteasome subunit beta type-9 [KO:K02741] [EC:3.4.25.1]
113581270  proteasome subunit beta type-8-like [KO:K02740] [EC:3.4.25.1]
113589196  proteasome subunit beta type-11-like [KO:K11598] [EC:3.4.25.1]
113574232  psmf1; proteasome inhibitor PI31 subunit [KO:K06700]
113571282  pomp; proteasome maturation protein [KO:K11599]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
eee04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   
LinkDB

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