KEGG   PATHWAY: hbh02010
Entry
hbh02010                    Pathway                                
Name
ABC transporters - Halomonas binhaiensis
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
hbh02010  ABC transporters
hbh02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Halomonas binhaiensis [GN:hbh]
Gene
E4T21_14630  sulfate ABC transporter substrate-binding protein [KO:K23163]
E4T21_05280  cysT; sulfate ABC transporter permease subunit CysT [KO:K02046]
E4T21_14640  cysT; sulfate ABC transporter permease subunit CysT [KO:K02046]
E4T21_05275  cysW; sulfate ABC transporter permease subunit CysW [KO:K02047]
E4T21_14645  cysW; sulfate ABC transporter permease subunit CysW [KO:K02047]
E4T21_05270  TOBE-like domain-containing protein [KO:K02045] [EC:7.3.2.3]
E4T21_14650  sulfate ABC transporter ATP-binding protein [KO:K02045] [EC:7.3.2.3]
E4T21_12100  substrate-binding domain-containing protein [KO:K05772]
E4T21_12090  ABC transporter permease [KO:K05773]
E4T21_12095  ATP-binding cassette domain-containing protein [KO:K06857] [EC:7.3.2.6]
E4T21_19185  modA; molybdate ABC transporter substrate-binding protein [KO:K02020]
E4T21_15645  modB; molybdate ABC transporter permease subunit [KO:K02018]
E4T21_19190  modB; molybdate ABC transporter permease subunit [KO:K02018]
E4T21_15640  ABC transporter ATP-binding protein [KO:K02017] [EC:7.3.2.5]
E4T21_19195  modC; molybdenum ABC transporter ATP-binding protein [KO:K02017] [EC:7.3.2.5]
E4T21_01520  Fe(3+) ABC transporter substrate-binding protein [KO:K02012]
E4T21_01530  iron ABC transporter permease [KO:K02011]
E4T21_01525  ABC transporter ATP-binding protein [KO:K02010] [EC:7.2.2.7]
E4T21_04285  thiamine ABC transporter substrate binding subunit [KO:K02064]
E4T21_04290  thiP; thiamine/thiamine pyrophosphate ABC transporter permease [KO:K02063]
E4T21_04295  ATP-binding cassette domain-containing protein [KO:K02062] [EC:7.6.2.15]
E4T21_11730  ABC transporter permease [KO:K11070]
E4T21_11735  ABC transporter permease [KO:K11071]
E4T21_11740  ABC transporter ATP-binding protein [KO:K11072] [EC:7.6.2.11]
E4T21_08875  ABC transporter substrate-binding protein [KO:K05845]
E4T21_13120  glycine betaine ABC transporter substrate-binding protein [KO:K05845]
E4T21_08880  ABC transporter permease [KO:K05846]
E4T21_08890  ABC transporter permease [KO:K05846]
E4T21_13105  ABC transporter permease [KO:K05846]
E4T21_13115  ABC transporter permease [KO:K05846]
E4T21_08885  ABC transporter ATP-binding protein [KO:K05847] [EC:7.6.2.9]
E4T21_13110  ABC transporter ATP-binding protein [KO:K05847] [EC:7.6.2.9]
E4T21_18365  ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC [KO:K10111] [EC:7.5.2.-]
E4T21_05700  ABC transporter ATP-binding protein [KO:K10112] [EC:7.5.2.-]
E4T21_18380  sugar ABC transporter substrate-binding protein [KO:K10227]
E4T21_18375  sugar ABC transporter permease [KO:K10228]
E4T21_18370  carbohydrate ABC transporter permease [KO:K10229]
E4T21_15470  ABC transporter substrate-binding protein [KO:K10236]
E4T21_15495  ABC transporter substrate-binding protein [KO:K10236]
E4T21_15475  sugar ABC transporter permease [KO:K10237]
E4T21_15480  carbohydrate ABC transporter permease [KO:K10238]
E4T21_07040  mlaD; outer membrane lipid asymmetry maintenance protein MlaD [KO:K02067]
E4T21_07035  mlaE; lipid asymmetry maintenance ABC transporter permease subunit MlaE [KO:K02066]
E4T21_07030  ATP-binding cassette domain-containing protein [KO:K02065]
E4T21_05685  carbohydrate ABC transporter substrate-binding protein [KO:K17315]
E4T21_05690  sugar ABC transporter permease [KO:K17316]
E4T21_05695  carbohydrate ABC transporter permease [KO:K17317]
E4T21_19230  ABC transporter substrate-binding protein [KO:K10439]
E4T21_19240  ribose ABC transporter permease [KO:K10440]
E4T21_19235  sugar ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
E4T21_11095  arabinose ABC transporter substrate-binding protein [KO:K10537]
E4T21_11085  araH; L-arabinose ABC transporter permease AraH [KO:K10538]
E4T21_11090  araG; L-arabinose ABC transporter ATP-binding protein AraG [KO:K10539] [EC:7.5.2.12]
E4T21_09565  ABC transporter substrate-binding protein [KO:K23508]
E4T21_09550  ABC transporter permease [KO:K23509]
E4T21_09555  ABC transporter permease [KO:K23509]
E4T21_09560  sugar ABC transporter ATP-binding protein [KO:K10820] [EC:7.5.2.9]
E4T21_17655  D-ribose ABC transporter substrate-binding protein [KO:K17202]
E4T21_17650  ABC transporter permease [KO:K17203]
E4T21_17645  sugar ABC transporter ATP-binding protein [KO:K17204]
E4T21_17525  substrate-binding domain-containing protein [KO:K17205]
E4T21_17520  rbsC; ribose ABC transporter permease [KO:K17206]
E4T21_17515  sugar ABC transporter ATP-binding protein [KO:K17207]
E4T21_11395  carbohydrate ABC transporter substrate-binding protein [KO:K17321]
E4T21_11410  sugar ABC transporter permease [KO:K17322]
E4T21_11405  carbohydrate ABC transporter permease [KO:K17323]
E4T21_11420  ABC transporter ATP-binding protein [KO:K17324]
E4T21_11415  ABC transporter ATP-binding protein [KO:K17325]
E4T21_06910  PstS family phosphate ABC transporter substrate-binding protein [KO:K02040]
E4T21_20665  phosphate ABC transporter substrate-binding protein [KO:K02040]
E4T21_06915  pstC; phosphate ABC transporter permease subunit PstC [KO:K02037]
E4T21_20670  ABC transporter permease subunit [KO:K02037]
E4T21_06920  pstA; phosphate ABC transporter permease PstA [KO:K02038]
E4T21_20675  pstA; phosphate ABC transporter permease PstA [KO:K02038]
E4T21_06925  phosphate ABC transporter ATP-binding protein [KO:K02036] [EC:7.3.2.1]
E4T21_20680  pstB; phosphate ABC transporter ATP-binding protein [KO:K02036] [EC:7.3.2.1]
E4T21_02125  phnD; phosphonate ABC transporter substrate-binding protein [KO:K02044]
E4T21_20200  phnD; phosphate/phosphite/phosphonate ABC transporter substrate-binding protein [KO:K02044]
E4T21_02130  phnE; phosphonate ABC transporter, permease protein PhnE [KO:K02042]
E4T21_20185  phnE; phosphonate ABC transporter, permease protein PhnE [KO:K02042]
E4T21_20190  phnE; phosphonate ABC transporter, permease protein PhnE [KO:K02042]
E4T21_03970  ABC transporter permease [KO:K02042]
E4T21_02120  phnC; phosphonate ABC transporter ATP-binding protein [KO:K02041] [EC:7.3.2.2]
E4T21_20195  phnC; phosphonate ABC transporter ATP-binding protein [KO:K02041] [EC:7.3.2.2]
E4T21_20500  transporter substrate-binding domain-containing protein [KO:K10036]
E4T21_20505  amino acid ABC transporter permease [KO:K10037]
E4T21_20510  amino acid ABC transporter ATP-binding protein [KO:K10038] [EC:7.4.2.1]
E4T21_20060  amino acid ABC transporter substrate-binding protein [KO:K09969]
E4T21_20050  amino acid ABC transporter permease [KO:K09970]
E4T21_20045  amino acid ABC transporter permease [KO:K09971]
E4T21_20040  amino acid ABC transporter ATP-binding protein [KO:K09972] [EC:7.4.2.1]
E4T21_13045  amino acid ABC transporter substrate-binding protein [KO:K16961]
E4T21_13040  amino acid ABC transporter permease [KO:K16962]
E4T21_13035  amino acid ABC transporter ATP-binding protein [KO:K16963]
E4T21_15950  transporter substrate-binding domain-containing protein [KO:K10022]
E4T21_15945  ABC transporter permease [KO:K10023]
E4T21_15940  ABC transporter permease [KO:K10024]
E4T21_15935  ATP-binding cassette domain-containing protein [KO:K10025] [EC:7.4.2.1]
E4T21_14370  amino acid ABC transporter ATP-binding protein [KO:K23058] [EC:7.4.2.1]
E4T21_19935  ABC transporter substrate-binding protein [KO:K01999]
E4T21_19920  branched-chain amino acid ABC transporter permease [KO:K01997]
E4T21_19910  ABC transporter ATP-binding protein [KO:K01995]
E4T21_19915  ABC transporter ATP-binding protein [KO:K01996]
E4T21_11465  MetQ/NlpA family ABC transporter substrate-binding protein [KO:K02073]
E4T21_11460  ABC transporter permease [KO:K02072]
E4T21_11455  methionine ABC transporter ATP-binding protein [KO:K02071]
E4T21_08580  urtA; urea ABC transporter substrate-binding protein [KO:K11959]
E4T21_08585  urtB; urea ABC transporter permease subunit UrtB [KO:K11960]
E4T21_08590  urtC; urea ABC transporter permease subunit UrtC [KO:K11961]
E4T21_08595  urtD; urea ABC transporter ATP-binding protein UrtD [KO:K11962]
E4T21_08600  urtE; urea ABC transporter ATP-binding subunit UrtE [KO:K11963]
E4T21_02700  peptide ABC transporter substrate-binding protein [KO:K15580]
E4T21_02695  oppB; oligopeptide ABC transporter permease OppB [KO:K15581]
E4T21_02690  ABC transporter permease subunit [KO:K15582]
E4T21_02685  ABC transporter ATP-binding protein [KO:K10823 K15583]
E4T21_08965  ABC transporter substrate-binding protein [KO:K13893]
E4T21_08960  microcin C ABC transporter permease YejB [KO:K13894]
E4T21_08955  ABC transporter permease [KO:K13895]
E4T21_08950  ABC transporter ATP-binding protein [KO:K13896]
E4T21_15225  iron ABC transporter permease [KO:K23186]
E4T21_15110  ABC transporter ATP-binding protein [KO:K23188] [EC:7.2.2.17 7.2.2.-]
E4T21_15175  iron-siderophore ABC transporter substrate-binding protein [KO:K23227]
E4T21_15180  fhuB; Fe(3+)-hydroxamate ABC transporter permease FhuB [KO:K23228]
E4T21_15170  ATP-binding cassette domain-containing protein [KO:K10829] [EC:7.2.2.16]
E4T21_11310  zinc ABC transporter substrate-binding protein [KO:K09815]
E4T21_12410  metal-binding protein ZinT [KO:K09815]
E4T21_11320  metal ABC transporter permease [KO:K09816]
E4T21_11315  metal ABC transporter ATP-binding protein [KO:K09817] [EC:7.2.2.20]
E4T21_19335  zinc ABC transporter substrate-binding protein [KO:K11707]
E4T21_19345  metal ABC transporter permease [KO:K11708]
E4T21_19350  metal ABC transporter permease [KO:K11709]
E4T21_19340  metal ABC transporter ATP-binding protein [KO:K11710] [EC:7.2.2.5]
E4T21_01170  chain-length determining protein [KO:K10107]
E4T21_01175  ABC transporter ATP-binding protein [KO:K09689] [EC:7.6.2.12]
E4T21_11945  ABC transporter ATP-binding protein [KO:K09691] [EC:7.5.2.14]
E4T21_07270  lipoprotein-releasing ABC transporter permease subunit [KO:K09808]
E4T21_14085  ABC transporter permease [KO:K09808]
E4T21_07275  ATP-binding cassette domain-containing protein [KO:K09810] [EC:7.6.2.-]
E4T21_14080  ABC transporter ATP-binding protein [KO:K09810] [EC:7.6.2.-]
E4T21_17065  heme ABC transporter permease [KO:K02195]
E4T21_17070  ccmB; heme exporter protein CcmB [KO:K02194]
E4T21_17075  ccmA; cytochrome c biogenesis heme-transporting ATPase CcmA [KO:K02193] [EC:7.6.2.5]
E4T21_18020  lptF; LPS export ABC transporter permease LptF [KO:K07091]
E4T21_18015  lptG; LPS export ABC transporter permease LptG [KO:K11720]
E4T21_07005  lptB; LPS export ABC transporter ATP-binding protein [KO:K06861] [EC:7.5.2.5]
E4T21_02775  FtsX-like permease family protein [KO:K09811]
E4T21_02770  ftsE; cell division ATP-binding protein FtsE [KO:K09812]
E4T21_07290  msbA; lipid A export permease/ATP-binding protein MsbA [KO:K11085] [EC:7.5.2.6]
E4T21_03260  peptidase domain-containing ABC transporter [KO:K13409]
E4T21_00940  ABC transporter ATP-binding protein [KO:K18893]
E4T21_16585  ABC transporter ATP-binding protein [KO:K18893]
E4T21_03280  type I secretion system permease/ATPase [KO:K12541]
E4T21_01705  type I secretion system permease/ATPase [KO:K12541]
E4T21_15200  multidrug ABC transporter permease/ATP-binding protein [KO:K06159]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   
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