KEGG   PATHWAY: lalg02010
Entry
lalg02010                   Pathway                                
Name
ABC transporters - Lentibacter algarum
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
lalg02010  ABC transporters
lalg02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Lentibacter algarum [GN:lalg]
Gene
LentiSH36_02648  ABC-type tungstate transport system, permease component [KO:K05772]
LentiSH36_02646  putative ABC transporter inner membrane component [KO:K05773]
LentiSH36_02647  ABC transporter ATP-binding protein [KO:K06857] [EC:7.3.2.6]
LentiSH36_00032  tauA; Sulfate starvation-induced protein 1 [KO:K15551]
LentiSH36_00030  ABC transporter permease protein [KO:K15552]
LentiSH36_00031  putative taurine import ATP-binding protein [KO:K10831] [EC:7.6.2.7]
LentiSH36_00514  modA; molybdate-binding periplasmic protein ModA [KO:K02020]
LentiSH36_00515  modB; molybdenum transport system permease protein ModB [KO:K02018]
LentiSH36_00516  modC; molybdenum import ATP-binding protein ModC [KO:K02017] [EC:7.3.2.5]
LentiSH36_01632  futA; iron uptake protein FutA [KO:K02012]
LentiSH36_02308  ABC-type Fe3+ transport system, periplasmic component [KO:K02012]
LentiSH36_01046  sfuB; putative Fe(3+)-transport system protein SfuB [KO:K02011]
LentiSH36_01596  putative putrescine transport ATP-binding protein [KO:K02010] [EC:7.2.2.7]
LentiSH36_02620  thiB; thiamine-binding periplasmic protein ThiB [KO:K02064]
LentiSH36_02619  thiP; thiamine transport system permease protein ThiP [KO:K02063]
LentiSH36_02618  thiQ; thiamine import ATP-binding protein ThiQ [KO:K02062] [EC:7.6.2.15]
LentiSH36_02098  potD; Spermidine/putrescine-binding periplasmic protein precursor [KO:K11069]
LentiSH36_00136  potF_1; putrescine-binding periplasmic protein PotF [KO:K11069]
LentiSH36_02096  potC1; putative spermidine/putrescine transport system permease protein PotC [KO:K11070]
LentiSH36_00135  potI_1; putrescine transport system permease protein PotI [KO:K11070]
LentiSH36_02097  potH_2; putrescine transport system permease protein PotH [KO:K11071]
LentiSH36_00134  potH_1; putrescine transport system permease protein PotH [KO:K11071]
LentiSH36_02095  ABC transporter ATP-binding protein [KO:K11072] [EC:7.6.2.11]
LentiSH36_00133  potG_1; putrescine transport ATP-binding protein PotG [KO:K11072] [EC:7.6.2.11]
LentiSH36_02686  potF_2; putrescine-binding periplasmic protein PotF [KO:K11073]
LentiSH36_02689  potI_2; putrescine transport system permease protein PotI [KO:K11074]
LentiSH36_02688  potH_3; putrescine transport system permease protein PotH [KO:K11075]
LentiSH36_02687  potG_2; putrescine transport ATP-binding protein PotG [KO:K11076] [EC:7.6.2.16]
LentiSH36_01735  gbuC; Glycine betaine/carnitine transport binding protein GbuC precursor [KO:K02002]
LentiSH36_01736  putative ABC transporter permease protein [KO:K02001]
LentiSH36_01737  putative glycine betaine transport ATP-binding protein [KO:K02000] [EC:7.6.2.9]
LentiSH36_00236  putative toluene tolerance protein, Ttg2 family [KO:K07323]
LentiSH36_01018  ABC-type transport system involved in resistance to organic solvent, periplasmic component [KO:K02067]
LentiSH36_01473  putative integral membrane protein [KO:K02066]
LentiSH36_01474  putative ABC transporter, ATP binding protein [KO:K02065]
LentiSH36_00150  putative basic membrane lipoprotein [KO:K07335]
LentiSH36_00635  putative lipoprotein [KO:K07335]
LentiSH36_00152  ABC transporter, permease protein [KO:K23535]
LentiSH36_00633  putative permease protein [KO:K23535]
LentiSH36_00151  ABC transporter, permease protein [KO:K23536]
LentiSH36_00632  putative permease protein [KO:K23536]
LentiSH36_00153  ABC transporter, ATP-binding protein [KO:K23537]
LentiSH36_00634  rbsA1; ribose import ATP-binding protein RbsA [KO:K23537]
LentiSH36_01237  putative phosphate transporter, phosphate-binding protein [KO:K02040]
LentiSH36_02876  phosphate ABC transporter substrate-binding protein, PhoT family [KO:K02040]
LentiSH36_01236  pstC; putative phosphate transport system permease protein PstC [KO:K02037]
LentiSH36_01235  pstA; putative phosphate transport system permease protein PstA [KO:K02038]
LentiSH36_01234  pstB; phosphate import ATP-binding protein PstB [KO:K02036] [EC:7.3.2.1]
LentiSH36_02821  hisP_2; histidine transport ATP-binding protein HisP [KO:K10021] [EC:7.4.2.1]
LentiSH36_00384  bztA; glutamate/glutamine/aspartate/asparagine-binding protein BztA [KO:K09969]
LentiSH36_00385  bztB; glutamate/glutamine/aspartate/asparagine transport system permease protein BztB [KO:K09970]
LentiSH36_00386  bztC; glutamate/glutamine/aspartate/asparagine transport system permease protein BztC [KO:K09971]
LentiSH36_00387  bztD; glutamate/glutamine/aspartate/asparagine transport ATP-binding protein BztD [KO:K09972] [EC:7.4.2.1]
LentiSH36_00503  hisP_1; histidine transport ATP-binding protein HisP [KO:K23058] [EC:7.4.2.1]
LentiSH36_01032  hypothetical protein [KO:K01999]
LentiSH36_01248  extracellular ligand-binding receptor [KO:K01999]
LentiSH36_02320  putative branched-chain amino acid transport system [KO:K01999]
LentiSH36_02844  putative receptor family ligand-binding protein [KO:K01999]
LentiSH36_01031  putative high-affinity branched-chain amino acid transport system permease protein [KO:K01997]
LentiSH36_01252  putative branched-chain amino acid transport system, permease protein [KO:K01997]
LentiSH36_02323  high-affinity branched-chain amino acid transport permease protein [KO:K01997]
LentiSH36_02845  amino acid/amide ABC transporter membrane protein 1, HAAT family [KO:K01997]
LentiSH36_01253  putative branched-chain amino acid transport system, permease protein [KO:K01998]
LentiSH36_02321  high-affinity branched-chain amino acid transport permease protein [KO:K01998]
LentiSH36_02846  ABC-type branched-chain amino acid transport system, permease component [KO:K01998]
LentiSH36_01029  putative high-affinity branched-chain amino acid transport ATP-binding protein [KO:K01995]
LentiSH36_01249  putative branched-chain amino acid transport ATP-binding protein [KO:K01995]
LentiSH36_02324  high-affinity branched-chain amino acid transport ATP-binding protein [KO:K01995]
LentiSH36_02847  branched-chain amino acid transport system ATP-binding protein [KO:K01995]
LentiSH36_00187  putative branched-chain amino acid transporter, ATP-binding protein [KO:K01995]
LentiSH36_01028  putative high-affinity branched-chain amino acid transport ATP-binding protein [KO:K01996]
LentiSH36_01250  putative branched-chain amino acid transport ATP-binding protein [KO:K01996]
LentiSH36_02319  high-affinity branched-chain amino acid transport ATP-binding protein [KO:K01996]
LentiSH36_02848  livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF [KO:K01996]
LentiSH36_00188  putative branched-chain amino acid transporter, ATP-binding protein [KO:K01996]
LentiSH36_02447  ABC transporter extracellular solute-binding protein [KO:K13893]
LentiSH36_02446  ABC transporter permease protein [KO:K13894]
LentiSH36_02445  ABC transporter permease protein [KO:K13895]
LentiSH36_02444  oligopeptide/dipeptide ABC transporter, ATP-binding protein [KO:K13896]
LentiSH36_02403  ABC-type Zn2+ transport system, periplasmic component/surface adhesin [KO:K09815]
LentiSH36_02400  znuB; high-affinity zinc uptake system membrane protein ZnuB [KO:K09816]
LentiSH36_02401  znuC; zinc import ATP-binding protein ZnuC [KO:K09817] [EC:7.2.2.20]
LentiSH36_02578  mntA; manganese-binding lipoprotein MntA [KO:K11604]
LentiSH36_02576  mntC; manganese transport system membrane protein MntC [KO:K11605]
LentiSH36_02575  mntD; manganese transport system membrane protein MntD [KO:K11606]
LentiSH36_02577  ABC-type Mn/Zn transport system, ATPase component [KO:K11607]
LentiSH36_01787  bioY; Biotin ECF transporter S component BioY [KO:K03523]
LentiSH36_00662  putative capsule polysaccharide export inner-membrane protein [KO:K10107]
LentiSH36_00663  putative capsular polysaccharide transport system, ATP-binding protein [KO:K09689] [EC:7.6.2.12]
LentiSH36_02602  ABC transporter, ATP-binding protein [KO:K09689] [EC:7.6.2.12]
LentiSH36_01704  lolC; lipoprotein-releasing system transmembrane protein LolC [KO:K09808]
LentiSH36_01703  lolD; lipoprotein-releasing system ATP-binding protein LolD [KO:K09810] [EC:7.6.2.-]
LentiSH36_01536  heme exporter protein CcmD [KO:K02196]
LentiSH36_01537  ccmC; heme exporter protein C [KO:K02195]
LentiSH36_01538  ccmB; heme exporter protein B [KO:K02194]
LentiSH36_01539  ccmA; cytochrome c biogenesis ATP-binding export protein CcmA [KO:K02193] [EC:7.6.2.5]
LentiSH36_01617  putative permease [KO:K07091]
LentiSH36_01618  putative permease [KO:K11720]
LentiSH36_02860  lptB; lipopolysaccharide export system ATP-binding protein LptB [KO:K06861] [EC:7.5.2.5]
LentiSH36_00589  protein insertion permease FtsX-like protein [KO:K09811]
LentiSH36_00588  ftsE; putative cell division ATP-binding protein FtsE [KO:K09812]
LentiSH36_02159  ABC-type multidrug transport system, ATPase and permease component [KO:K11085] [EC:7.5.2.6]
LentiSH36_01552  ABC transporter, ATP-binding protein [KO:K24821]
LentiSH36_01943  ABC transporter ATP-binding protein [KO:K18893]
LentiSH36_00862  putative ATP-binding/permease fusion ABC transporter [KO:K12541]
LentiSH36_00921  putative ATP-binding/permease fusion ABC transporter [KO:K12541]
LentiSH36_00234  aprD; alkaline protease secretion ATP-binding protein AprD [KO:K12536]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   
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