KEGG   PATHWAY: lmm03430
Entry
lmm03430                    Pathway                                
Name
Mismatch repair - Leuconostoc mesenteroides subsp. mesenteroides J18
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
lmm03430  Mismatch repair
lmm03430

Other DBs
GO: 0006298
Organism
Leuconostoc mesenteroides subsp. mesenteroides J18 [GN:lmm]
Gene
MI1_07075  DNA mismatch repair protein MutS [KO:K03555]
MI1_07410  DNA mismatch repair protein MutS [KO:K07456]
MI1_07070  DNA mismatch repair protein MutL [KO:K03572]
MI1_08155  ATP-dependent DNA helicase [KO:K03657] [EC:5.6.2.4]
MI1_02540  ATP-dependent DNA helicase PcrA [KO:K03657] [EC:5.6.2.4]
MI1_07215  exodeoxyribonuclease VII large subunit [KO:K03601] [EC:3.1.11.6]
MI1_07210  exodeoxyribonuclease VII small subunit [KO:K03602] [EC:3.1.11.6]
MI1_06535  single-stranded-DNA-specific exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
MI1_08610  single-stranded DNA-binding protein [KO:K03111]
MI1_03555  DNA polymerase III subunit epsilon [KO:K02337] [EC:2.7.7.7]
MI1_03135  DNA polymerase III [KO:K03763] [EC:2.7.7.7]
MI1_00010  DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
MI1_01130  DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
MI1_07130  DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
MI1_01155  DNA polymerase III subunit delta [KO:K02341] [EC:2.7.7.7]
MI1_06840  DNA polymerase III subunit alpha [KO:K02342] [EC:2.7.7.7]
MI1_02550  ligA; aromatic ring-opening dioxygenase LigA [KO:K01972] [EC:6.5.1.2]
MI1_09386  DNA methyltransferase [KO:K06223] [EC:2.1.1.72]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   
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