KEGG   PATHWAY: mhaq03430
Entry
mhaq03430                   Pathway                                
Name
Mismatch repair - Mannheimia haemolytica 89010807N
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
mhaq03430  Mismatch repair
mhaq03430

Other DBs
GO: 0006298
Organism
Mannheimia haemolytica 89010807N [GN:mhaq]
Gene
WC39_00530  DNA mismatch repair protein MutS [KO:K03555]
WC39_01800  DNA mismatch repair protein MutL [KO:K03572]
WC39_09945  DNA mismatch repair protein MutH [KO:K03573]
WC39_03030  uvrD; DNA-dependent helicase II [KO:K03657] [EC:5.6.2.4]
WC39_07375  sbcB; exonuclease I [KO:K01141] [EC:3.1.11.1]
WC39_08340  xseA; exodeoxyribonuclease VII large subunit [KO:K03601] [EC:3.1.11.6]
WC39_08420  exodeoxyribonuclease VII small subunit [KO:K03602] [EC:3.1.11.6]
WC39_06085  ssDNA exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
WC39_05810  single-stranded DNA-binding protein [KO:K03111]
WC39_06395  single-stranded DNA-binding protein [KO:K03111]
WC39_08290  single-stranded DNA-binding protein [KO:K03111]
WC39_07915  single-stranded DNA-binding protein [KO:K03111]
WC39_04570  single-stranded DNA-binding protein [KO:K03111]
WC39_04195  dnaE; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
WC39_02930  DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
WC39_10315  DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
WC39_08800  DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
WC39_01530  DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
WC39_10385  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
WC39_02435  DNA polymerase III subunit chi [KO:K02339] [EC:2.7.7.7]
WC39_02285  DNA polymerase III subunit psi [KO:K02344] [EC:2.7.7.7]
WC39_03480  ligA; NAD-dependent DNA ligase LigA [KO:K01972] [EC:6.5.1.2]
WC39_03790  DNA adenine methylase [KO:K06223] [EC:2.1.1.72]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   
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